Halothermothrix orenii: Hore_07540
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Entry
Hore_07540 CDS
T00838
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hor
Halothermothrix orenii
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hor03032
]
Hore_07540
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_07540
Enzymes [BR:
hor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hore_07540
DNA replication proteins [BR:
hor03032
]
Prokaryotic type
DNA Topoisomerases
Hore_07540
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hore_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ACL69511
UniProt:
B8CW42
LinkDB
All DBs
Position
811024..813099
Genome browser
AA seq
691 aa
AA seq
DB search
MGNKSNNTLVIVESPAKAKTISKFLGKGYKVEATMGHVIDLPKSKLGINIDKGFEPRYIT
IRGKGKVLKKLRKEVKKSKDVLLATDPDREGEAISWHLTRALKIDEDKPRIEFNEITKSA
IKNALKNRRPIDKNLVNSQQARRLLDRLVGYKLSPLLWKKVRRGLSAGRVQTVAVKLLCN
REKEIESFEPEEYWTISASFNKKDKDFIADLYRISGKKFKINNEKEAKQILEDLNKSKFV
VSDIKEKTRKRNPNPPFTTSTLQQRASSILGFSAKKTMYLAQQLYEGIDMGSEGTTGLIS
YIRTDSTRISREAQKQALDYIKEAFGDKYIPDKVKVYKAKEGSQDAHEAIRPTSVDRTPG
KVKKYLNKDQYRLYKLIWERFVASQMSPAQYKQVKVLIKAGDKYIFRAKGSRIIFPGFLR
VNTSSQKKDIILPPVKKSERLDVKEIKPEQHFTQPPPRYTEATLVKTLEEEGIGRPSTYA
PIISTIISRGYVERQGKQLKPTELGFIVTDLLSKYFPDVTDIEFTAHMEERLDKIEDGKD
EWRNVLEDFYSNFSRRLKEASEEMEEVKLEDEVTDEVCEKCGRNMVIKYGRYGKFLACSG
YPECKNTKPYVIKTGVKCPQCKEGELVQRKSRKGRTFYGCSSYPDCKFVVWNKPVKEKCP
ECGGLMVEKNSKKQGRYYLCINKECGYKKEV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggggaataaaagtaataatacactggtaattgttgaatctcctgctaaagctaaaaca
atatcaaagtttctgggaaaaggatataaagtggaagcaacaatgggccatgttattgat
ctacccaagagcaaactgggaataaatatagataaaggttttgaacccaggtatataaca
atcaggggtaaaggaaaagtattaaaaaaattaagaaaggaagtaaaaaagagtaaagat
gttctcctggcaactgaccctgatagagaaggggaagccatatcatggcatctgacccgg
gctttgaaaatagatgaagataaaccaaggattgaatttaatgaaataactaaaagtgct
attaaaaatgcccttaaaaaccgcaggcctatagataagaatctggttaattcccagcag
gccagacgcctgcttgaccgtcttgtcggttacaaactcagtccactattatggaaaaag
gtgagacggggtttaagtgccgggcgtgttcagacagttgctgtcaaattgttatgtaat
cgggaaaaagagatagagtctttcgaacctgaagaatactggactatttctgcttcattt
aataaaaaagataaagattttatagctgatctgtaccgaatttcaggtaaaaaattcaaa
attaataatgagaaagaagcaaaacaaattttagaagatttaaataaaagtaaatttgtt
gtaagtgacataaaagaaaaaacaaggaaacgtaaccccaatccaccctttacaacaagt
acccttcaacagagggcttcttcgattctgggcttttctgctaaaaaaacaatgtatctg
gcccagcagttatatgaaggaatagatatgggtagcgaagggaccactggtcttataagt
tatatacgtactgacagtacaagaatctccagagaagcccagaaacaggctttagactac
attaaagaagcttttggggacaaatatattcccgataaagtgaaggtatataaggcaaaa
gaaggttcccaggatgctcatgaggctattcgtcctacttcagttgaccgtactccaggt
aaggtaaaaaaatatttaaacaaagaccagtacaggttatataagttgatctgggaaagg
tttgttgccagtcaaatgagtccagctcagtataaacaggtgaaagtattgataaaagca
ggagataaatatattttcagggcaaagggatccagaattatattcccggggtttttacgg
gttaacacaagcagtcagaaaaaagacatcatattaccacctgttaaaaagtctgaaaga
cttgatgttaaggaaatcaagccagaacagcactttacccagccaccaccacgttatacg
gaagctaccctggttaaaacattagaagaagagggaataggccgccccagtacttatgct
ccgattatttcaacaataatctcccggggctatgtggagcgtcagggtaagcagttaaaa
ccgactgaactgggttttatagttacagatctgttatcaaaatattttcctgatgtaact
gacatagaatttaccgcacatatggaagaaaggcttgataagatagaagatggcaaagat
gaatggcgtaatgtgcttgaagatttttattccaatttttccaggagacttaaagaggcc
agtgaggaaatggaagaagttaaacttgaagatgaggtaactgatgaagtatgtgaaaag
tgtggcaggaatatggtaataaaatatggtcgttatggcaaatttctggcctgttctggt
tatcctgaatgtaaaaataccaagccttatgttattaaaactggagttaaatgtcctcag
tgtaaagagggagagcttgttcaaagaaaaagccgtaaagggcgtactttttacggatgt
agttcttaccctgattgcaaatttgttgtctggaataaaccagttaaagaaaaatgccct
gaatgtggtggccttatggtagagaagaactcaaaaaagcaaggccggtattatctctgt
attaacaaagagtgtggttataagaaagaagtataa
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