Halothermothrix orenii: Hore_08700
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Entry
Hore_08700 CDS
T00838
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hor
Halothermothrix orenii
Pathway
hor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hore_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hor03019
]
Hore_08700
Messenger RNA biogenesis [BR:
hor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Hore_08700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ACL69626
UniProt:
B8CWF7
LinkDB
All DBs
Position
937182..938858
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AA seq
558 aa
AA seq
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MPKKHNINEVKMIPLGGVGEIGKNMMLVEMAGEILIIDAGVMFPEDDLLGIDLVIPDFSY
VKENANRVKGIVLTHGHEDHIGALPYLLKEINVPVFGTKLTLGLVEGKLKEHRINKGRKL
KVVNPGSSINVGSFKVDFILVNHSIADTCALAIHTPLGPIIYASDFKFDQTPIDGEVADF
HKLAELGDNYPGVLALFADSTNVEREGYTLSEKVVGGTIDDIFRKARNRIVVATFASNIH
RVQQIVDAAFKYNRKIAFTGRSMINNIEIARELGYLIIPEDMIVDIRNISNLPDDKIVLL
TTGSQGEPMAALTRMARGDHYHINIKDGDTVVISASAIPGNEKLVGQTINQLFKRGANVI
YEDISGVHVSGHASQEELKLMLNLVKPEFFVPVHGEFRHLHRHAKLAEEVGIPEKNIYIA
DIGDVISFTKRRVKKVGEIRAGQVLVDGLGVGDVGNIVLRDRKLLSEDGIIIVVVTIDKK
GKILSGPDIITRGFVYIRESEELIAEATSRVEKALAECEANNITEWSVLKSTIRDALNDY
IYKKIKRNPMILPIIMQV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaaacataatataaatgaagtaaagatgattcctttaggtggagtcggggaa
ataggtaaaaacatgatgcttgtcgaaatggctggagagatattaattattgatgccggg
gtcatgtttcctgaagatgatttgctgggaattgacctggtaatccctgatttttcttat
gtaaaggaaaatgccaacagggtcaaaggtattgttttaacccatggtcatgaggatcat
atcggggctttaccatacctgttaaaagaaattaatgttcctgtctttggaactaaattg
accctggggcttgttgaaggtaaactcaaggagcatagaataaataaagggcgtaagtta
aaagttgttaacccaggtagttcaataaatgtaggttcttttaaagtagatttcatactt
gttaaccatagtattgcagatacctgtgctctggccattcacacacctttaggaccgatt
atttatgccagtgattttaagtttgatcagacacctatcgatggtgaagtagcagacttt
cataaactggccgaactcggtgataattaccccggagtactggctttgtttgcagatagt
accaatgtagaacgggaagggtatactctttcagaaaaagtagttggtggtactattgac
gatatttttagaaaggcacgtaatagaattgtagtggctacttttgcttccaatattcac
cgggttcagcaaatagtagatgctgcctttaaatataaccgtaagattgcttttacggga
cggagtatgattaataatatagaaattgccagggaactgggttatttaataattcctgaa
gatatgatagtagatattagaaatatatctaatctccctgatgataaaattgtgctttta
actaccggtagccagggagagcccatggcagcattaaccagaatggccaggggtgatcat
tatcatataaatattaaagatggtgacacggttgttatttctgcatcggcaatacccggg
aacgaaaaactggttggacagacaattaaccagttatttaaaagaggggccaatgtaatt
tatgaagacatttcaggagttcatgtatccggacatgccagtcaagaagaattaaaattg
atgttaaatctggtaaaacctgaattctttgttcctgttcatggtgaattcaggcattta
caccgacatgctaaattagcagaagaagttggcatccctgagaagaatatctatattgct
gatattggtgatgtaattagtttcaccaaacgaagggtaaaaaaggtcggcgaaataagg
gccggtcaggttctggttgacggccttggtgttggtgatgttggcaacattgtattaagg
gatagaaaacttctttcagaagatggtattattattgtagttgtgaccattgataagaaa
gggaaaatattatcaggtccagatattattacccggggatttgtatatatccgtgaatca
gaagaattaattgctgaagcaacctcacgtgttgaaaaagcactggctgagtgtgaagcg
aataatattactgagtggtctgtattaaaaagtaccattagggatgcattaaatgattat
atttataaaaaaattaaacgtaatcccatgattctccctattattatgcaggtataa
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