Halothermothrix orenii: Hore_12310
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Entry
Hore_12310 CDS
T00838
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hor
Halothermothrix orenii
Pathway
hor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hore_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_12310
Enzymes [BR:
hor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hore_12310
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hore_12310
RecFOR pathway proteins
Hore_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
TIP49
AAA_14
AAA_22
NB-ARC
DUF815
nSTAND3
RNA_helicase
NTPase_1
AAA_3
AAA_24
MCM
TsaE
AAA_17
ABC_tran
AAA_33
AAA_18
AAA_28
Rad17
NPHP3_N
Bac_DnaA
ATPase_2
IstB_IS21
KAP_NTPase
bpMoxR
AAA_19
NACHT
Sigma54_activ_2
Parvo_NS1
RsgA_GTPase
AAA_7
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACL69981
UniProt:
B8CXG2
LinkDB
All DBs
Position
complement(1324942..1325970)
Genome browser
AA seq
342 aa
AA seq
DB search
MDLENRIISPEKKEDDMALDRSLRPERLNNFIGQEKVKEKLSIFIEAAITRQEPLDHVLL
YGPPGLGKTTLANIIANELNVSIHTTSGPAIERPGDLAAILTNLQPKDVLFIDEIHRLNK
VVEEVLYPAMEDYSLDIIIGKGPSARSIRLDLPPFTLVGATTRAGLLSSPLRDRFGVINR
LEFYGTDELAEIIKRSARVLGIEVNEDGAVEISKRSRGTPRIANRLLKRVRDYAEVKADG
IIDTEVVDKALKLLEIDELGLDHIDHKLLKTIIKKFNGGPVGLNTLAASISEETETIEDV
YEPYLLQLGFIERTPRGRVATLAAYEHLDVDYKNKSQSLFNN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatttagaaaatagaattatttcaccagaaaaaaaagaagatgatatggctcttgac
aggagtttaaggcctgaaaggcttaataactttattggtcaggagaaggttaaggaaaaa
ctcagtattttcatagaagccgcaattaccaggcaggaaccccttgatcatgttttgctt
tatggcccccccggtctgggtaaaaccaccctggccaatataatagccaatgaacttaat
gttagcattcatactacttcaggacctgctattgaacgacctggtgacctggccgctatc
ttaacaaatttacaacccaaagatgttttatttattgatgagattcaccgcttaaataaa
gttgtagaagaggtattatatccggctatggaagattattccctggatataataataggt
aagggaccttctgcccgttcaataaggttagatctacctccatttactctggttggggct
acaaccagagccgggttattaagttcgccgctcagggacaggttcggggtaattaacaga
ctggaattttatggtactgatgaactggctgaaataataaaacgttcggccagggttctg
gggatagaagtaaatgaagatggggctgttgaaatctctaaaagatcccggggaaccccc
agaattgccaacaggttattgaagagggtcagggattatgctgaagttaaagcagatggt
attatagatactgaggtggttgataaggccctgaagctgcttgaaatagatgaactgggg
ttagaccatattgatcataaactactaaaaacaattattaaaaaatttaacgggggtccg
gtgggtttaaatacccttgctgcctctataagtgaggaaacagagacaattgaagatgtt
tatgagccctatctgttacagcttggttttattgaacgaaccccgcggggtcgggttgca
accctggctgcttacgaacaccttgatgtagactataagaataagtcgcaatctcttttt
aataattaa
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