Helcococcus ovis: EQF90_001960
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Entry
EQF90_001960 CDS
T09706
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hov
Helcococcus ovis
Pathway
hov03030
DNA replication
hov03430
Mismatch repair
hov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQF90_001960
03430 Mismatch repair
EQF90_001960
03440 Homologous recombination
EQF90_001960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hov03032
]
EQF90_001960
03400 DNA repair and recombination proteins [BR:
hov03400
]
EQF90_001960
Enzymes [BR:
hov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EQF90_001960
DNA replication proteins [BR:
hov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EQF90_001960
DNA repair and recombination proteins [BR:
hov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EQF90_001960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WNZ02051
LinkDB
All DBs
Position
411113..414571
Genome browser
AA seq
1152 aa
AA seq
DB search
MYMEFTHLHLHTEYSLLDGFAKIDKVLDRCVEYGMKSVAITDHGVMFGVIDFYKKAKKRG
IKPIIGCEIYLSEGSYLEKTPQNKKRYHLILLAENWIGYQNLIKIVSESFINGYYYKPRV
DKSVLKKYSEGIIALSACMSGEVQIHIRNNEIEFAKKSALEYKEIFGEDNFYLELQDHGL
LEQKKINKYLKEFSKELEIPLVATNDVHYTDQEDAKIQDILMCISTGKTVDNLDRMRFPN
SQFYFKSPKEMEKLFQDTPEALINTQVIAERCNVDFKFHDMHLPFFDIQENHEQYLRELV
FSGLKNKYNELTENIINRANEELDIINKMGFTDYFLIVWDFIDYAKKQGIAVGPGRGSAA
GSIVSYSLGITGLDPIKYDLLFERFLNPERVSMPDIDIDFDYERRNEVIEYVKEKYGESN
VAQIVTFGTLAARNAIRDVGRVTSVNSDVVDKIAKQVPQEINMTIKKALNISEDFRKSYE
ASDENKKLIDTAMQIEGMPKNTSTHAAGVVIASKPLNEFVPLYIGDKSILTQYNMTELEE
LGLLKMDFLGLRTLTVISDSIKLVKYNKGIDIDIENIDLNDKEVLNIFNVAETIGVFQFE
SEGMRAFLKELKPTRFDDLIAANSLFRPGPMNEIPNYIRNRHNKELVTYLHPLLESILEP
TYGTIVFQEQVMQIVQKLAGFSLGEADNLRRAMGKKKMKVMEENREYFIYGRIENGEISV
PGCLRNGIDEDIANKIYDLMIDFAKYAFNKSHSAAYSFVAFQTAWLKVHYPEEFMASLLS
SVMGSSDKVYLYIKEAKKMGIEILLPSVNSSYKNFSVEGRKIRIGLSVIKSLGVNIVEAI
VNERKKGKFKDFDDFVERMVNNSEAKLNKKSLEYLIFSGAMDGFGLNRAQMVSICERAVE
RYSKSNNNIIGQEDIFSMINGNNFKIEVPKIPEFSKVEMLKKEKEYIGAYITDHPFSSYE
KLVSNYVDFTTLDLIEEKVKYDKNVIFSGIIISVKAIFTKQNRKMCFIELEDIYGKIEAV
VFPQIYEKYKEILIEDKAVLINGKLQINDNRVANIIINNIREINNEIFSQNSERNGIIYE
DKVLYLKMKYSDKNIYSKIRNELLKYKGKSEVVIYFYDISKSVSLKNIKINLDLTLINSL
VNLLGNDSVIIK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atatacatggaatttacacatttacatttacatacagaatatagccttttagatggtttt
gctaaaattgacaaagtattagatagatgtgttgaatatggaatgaaatctgtagcgatt
acagaccatggagtgatgtttggagttatagatttttataaaaaggcaaaaaaaagagga
ataaaaccaattattgggtgtgagatatatttaagtgagggctcttatttagaaaaaaca
cctcaaaataaaaaaagatatcatttaattttacttgctgaaaattggataggatatcaa
aatttaataaaaattgtttcagagagtttcatcaatggatattattacaaacctagagtt
gataaaagtgtattgaaaaaatattctgaagggataatagcattgtcagcttgcatgagt
ggtgaagtccaaattcatataagaaataatgaaatagaatttgctaaaaaatctgcttta
gaatataaggaaatatttggtgaagataacttttatttagaattacaagatcatgggctt
ttagaacaaaagaaaattaataaatatctaaaagaatttagtaaagaattagaaattcca
ctagttgctacaaatgatgttcattatacagatcaggaagatgcaaaaattcaagatatt
ttaatgtgtatatcaacaggaaagactgttgataatcttgatagaatgagatttccaaat
tctcaattttattttaagagtcctaaagaaatggaaaaattatttcaggatactccagag
gcacttataaatacacaagttatagcagaaagatgtaatgttgattttaagtttcatgat
atgcatttaccattttttgatattcaagaaaatcatgaacaatatttaagagaacttgtg
tttagcggacttaaaaataaatataatgaattaactgaaaatataataaatagagctaat
gaagaacttgatataatcaataaaatgggttttacggattatttcttaattgtatgggat
tttattgactatgctaaaaagcaaggtatagctgtaggacctggaagagggtcagctgcc
gggtcaatagtttcgtattcattgggaattacaggattggatcctataaaatatgattta
ctttttgaaagatttttaaatcctgagagagtatcaatgcctgatattgatattgatttt
gattatgaaagaagaaatgaagtaattgaatatgtaaaagaaaaatatggggaaagtaat
gtggctcaaatagttacatttggaacgttagctgccagaaatgcaattagagatgtaggt
agagttacatcagttaatagtgatgttgttgataaaattgcaaagcaagtacctcaagaa
ataaatatgactataaaaaaagctcttaatatctcggaagattttagaaagtcttatgag
gcttccgatgaaaataaaaaacttattgatacagcgatgcaaatagaaggaatgccgaaa
aatacatctactcatgcagcaggtgtagtaatagcatctaaaccattaaatgaatttgtc
ccattatatataggagataaatctattcttactcaatacaatatgacggaacttgaagaa
ttgggtttattgaaaatggattttttaggtcttcgtacgctgacagttataagtgattct
ataaaattggtaaaatacaataagggaatagatatagatattgaaaatatagatttaaat
gataaagaagttttgaatatttttaatgttgcagaaacaataggggtatttcaatttgaa
tcagaaggaatgcgagcgtttttgaaagaattgaaacctacgaggtttgatgatcttata
gcagcaaattcactatttagacctggccccatgaatgaaattccaaattatatcagaaat
agacacaataaagagttagtaacatatcttcaccctttattagaatctattttagagcca
acatacggaacgatagtatttcaagaacaagttatgcaaattgtacagaagttagcaggt
ttttcattaggagaagctgataatttaagacgtgcaatggggaaaaagaaaatgaaagtc
atggaagaaaatagagaatattttatttatggaaggattgaaaatggagaaatatcagtt
ccgggatgccttagaaatggaattgatgaagatatagcaaataaaatttatgatttgatg
attgattttgcaaaatatgcatttaataaatcacattctgcggcatattcctttgttgca
tttcaaacagcttggcttaaagttcattatccggaagagtttatggcatcattattatct
tctgtaatgggaagctcagacaaagtttatctttatataaaagaagcaaaaaaaatggga
atagaaatattattgcctagtgtaaattcatcttataaaaatttttcggtagaaggtaga
aaaatcagaattggactttctgtaataaaaagcttaggagttaatattgttgaagcaata
gtaaatgaaagaaaaaagggcaaatttaaggattttgatgattttgttgaaagaatggta
aataattcagaagccaaactaaacaaaaaatctttagaatatttaattttttccggagct
atggatggatttggactgaatagagcacagatggtttcaatatgtgaaagagctgtagag
agatattcaaaaagcaataacaatataattggacaggaagatatattttcaatgataaat
ggaaataattttaaaattgaagtcccaaaaataccggaattttcaaaggtagagatgtta
aaaaaagaaaaagaatatataggggcatatattacagatcatccttttagttcgtatgag
aaattagtttccaattatgttgattttactacattagatttaattgaggaaaaagttaaa
tatgataaaaatgtaatattttctggcataataatttcagttaaagcaatttttacaaaa
caaaatagaaaaatgtgttttatagagttagaagatatttacggaaaaatagaagctgtt
gtttttccgcaaatatatgaaaaatacaaggaaatattaatagaggataaggcggttctc
ataaatggaaaattacaaataaatgataatagagttgcaaatataataattaataatata
agagaaataaataacgaaattttttcacaaaatagtgaaagaaatggtataatatacgag
gacaaagttctatatttaaaaatgaaatattcagataaaaatatatattctaaaattaga
aatgaattacttaaatataaaggaaaatctgaggtagttatttatttttatgatataagt
aaatcagtttcattaaaaaatataaaaataaatttagatttaactttgataaatagttta
gtaaatttactaggcaatgatagtgtaataataaagtag
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