Helcococcus ovis: EQF90_002525
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Entry
EQF90_002525 CDS
T09706
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hov
Helcococcus ovis
Pathway
hov03420
Nucleotide excision repair
hov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EQF90_002525
03430 Mismatch repair
EQF90_002525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hov03400
]
EQF90_002525
Enzymes [BR:
hov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EQF90_002525
DNA repair and recombination proteins [BR:
hov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQF90_002525
MMR (mismatch excision repair)
Other MMR factors
EQF90_002525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_12
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DEAD
DCX2_DCDC1
Motif
Other DBs
NCBI-ProteinID:
WNZ01732
LinkDB
All DBs
Position
complement(535855..537693)
Genome browser
AA seq
612 aa
AA seq
DB search
MKFSENQLKVINHKKGPALVLAVPGSGKTTVLLARINNLINNGINPENILAMTFSKTQAK
DMEIRYKKIYGDQNIHFSTIHSFAYGIIKKFSNKLSNFMIIESSKEYNKYSIVQQIFLHV
RKKYMNDEQLESFFRVSSFLKNTLMDYNEYKKMYSAIFNGFEKVYTIYEKFKKDKNLLDF
DDILIEALKILQTNKQALDFLQNKFHYVQIDEGQDTSYVQLKIISLVSQKNNNLFIVADD
DQSIYGFRGANSKQLLDFPNVYPDAKIFYMENNYRSTQNIIKFSNKLIKNNKQRYLKVIK
SNNSEGNNVNIISTKNTKQQIEYIIDKALKKLCLNETVAILYRNNISAISFINYIPDNVD
FYIKDSTNAFYSHQIINDIIDIINFSKDQYDLNLFKKIYYKLNLFIKKEFVKQLEFMDES
DDVIERLKNVEGINNFFLEKIYLLSYYMDKLSSLNFSDAVIFVLRSMDYYEYVKELSRRT
TGSMISYDRIIDTLINISKDIKSVSEFENKVRNLIEKQKNHGINSSNLTLSTIHGSKGLE
FDNVFIIDLVDKEFPSSYSESVNEELGILEEERRLFYVGITRAKYNLTLLYPKKLFINEV
KNSSFINEITRN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagaaaatcaattaaaagtaataaatcataaaaaaggtccagcattagta
ttggcagtccccggttccggtaaaactacagtattattagcaagaataaataatttaata
aacaatggaattaatcctgaaaatattttggcaatgacattttctaagactcaagctaaa
gatatggaaattagatataaaaaaatctacggtgatcaaaacattcatttttcaactatt
cattcttttgcatacggtataataaaaaaattttcaaataaattatcaaattttatgatt
atagaatcatcaaaagaatataataaatactctattgtccagcaaatatttttacatgtt
agaaaaaaatatatgaatgatgaacaattggaaagtttttttagagtatctagcttttta
aaaaatacattaatggattataatgaatataaaaagatgtattccgctatatttaatggt
tttgaaaaagtatacactatatatgaaaaattcaaaaaagataaaaatttacttgatttt
gatgatatacttattgaagccttgaaaatacttcaaactaataaacaagcactagatttt
cttcaaaataaatttcattatgtacaaattgatgaaggtcaggatacatcatacgtacaa
ttgaaaatcatcagcttggtatcacaaaaaaataataatttatttattgtagcagatgat
gatcaatcaatatatggatttagaggtgctaattctaaacaattacttgattttcctaat
gtttatccggatgctaaaattttttatatggaaaataattatagatctactcaaaatata
ataaaattttcaaataaattaataaaaaataacaaacaaagatatttaaaagttataaaa
tcaaataattctgaaggcaataatgtaaatataatttctactaaaaatacaaagcagcaa
attgaatatattattgataaggcattaaaaaaactttgcttaaatgaaacagttgcaata
ttatacagaaataatatttcggcaatatcttttattaattatattccagataatgttgat
ttttatataaaagatagtactaacgctttttattcacatcaaataattaatgatattatt
gatattataaatttctctaaggatcaatatgacttaaatttatttaaaaaaatttattat
aaattaaatttatttataaaaaaggaatttgtaaaacaattggaattcatggatgaaagt
gatgatgtcatagaacgattaaaaaacgttgaaggaataaataattttttcctagagaaa
atatacttactttcatattacatggataaattatcttcattaaatttttcagatgctgta
atatttgttttaagaagtatggattattatgaatatgtaaaagaactttctagacgaaca
acaggatccatgatttcctatgatagaattatagatactttgattaatatttctaaagac
attaaatctgtttcagaatttgaaaataaagtcagaaatttaatcgagaaacaaaaaaat
cacggcatcaattcttcaaatttaacactttcaactatacatggttcaaaaggcttagaa
tttgataatgtgtttataatagatttagttgataaagaatttccttcatcttattccgaa
tcggtaaatgaagaattaggaattttagaagaggaaagaaggttattttatgttggaatt
acaagagcaaaatataatttaaccctgctttatccaaaaaaactctttataaatgaggtt
aaaaattcttcattcattaatgaaataacccgaaactaa
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