Helcococcus ovis: EQF90_003500
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Entry
EQF90_003500 CDS
T09706
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hov
Helcococcus ovis
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hov03032
]
EQF90_003500 (topA)
03400 DNA repair and recombination proteins [BR:
hov03400
]
EQF90_003500 (topA)
Enzymes [BR:
hov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EQF90_003500 (topA)
DNA replication proteins [BR:
hov03032
]
Prokaryotic type
DNA Topoisomerases
EQF90_003500 (topA)
DNA repair and recombination proteins [BR:
hov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EQF90_003500 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DUF1272
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WNZ01914
LinkDB
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Position
743411..745468
Genome browser
AA seq
685 aa
AA seq
DB search
MAKNLIIVESPTKAKTIGKFLGKNYKIMASVGHLRDLPKSRMGVDVENNFEPEYINVRGK
ASTINAIKAEAKKVDNVYLASDPDREGEAIAWHLAFLLDLDLKEKNRVVFPEITKETVKE
AIKHPRAINLNLVDAQQARRILDRIVGYKLSPILWKKVKNGLSAGRVQSAALKLIIDREN
EIRKFIPEEYWSIDFVATHNKIDFTGDFIGEYIDNKIKNIKLTNENDVDNIISKIDKDNF
KIIDKDVKEKSRKPYEPFTTSTLQQEASKRIYFSTSKTMSVAQQLYEGINVGEGSVGLIS
YMRTDSTRLSNGIIDEAISYINENYGKEYASKGRSYNKKKSGSQDAHEAVRVSSIYRTPE
KIRDYLTTDQYKLYRLIWERTLASQMKDSKYLSTRYDFESNGILFRANGSIVTFDGFSKV
WTIADKKVELPNFEIGDVFSASKINKEKHFTKPKARFTEASLVKELEKNGIGRPSTYSSI
IKSLLSRYYVEFEEKSLVPTEIGFTVIELLLQYFKTIINEDFTAEMENSLDKIEESDVEW
RKLIKDFYDKFDELLKKAENSSKDFEIKDKPTGEKCPECGEDLLYKKGRNGDFIGCSNFP
KCTFTKNIVKELGIVCPKCGGKIIEKISKRGKVFYGCENYPQCDWASWDKPTGEKCAECG
DLMVHRKNRKMDAIICNNENCIRNK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaatttaattattgtagaatcacctacaaaggctaaaacaattggaaaattt
ttaggaaaaaattataagataatggcttcagttgggcatttaagagatcttccaaaaagt
aggatgggtgtagatgttgaaaacaattttgaaccggaatatattaatgtaagaggaaaa
gcttcaacaataaatgcaataaaagcagaagcaaaaaaagtagataatgtttatcttgca
tctgatcctgatagagagggtgaagcaatagcatggcatttagcatttttattggattta
gatttgaaagaaaaaaatagagttgtatttccggaaattacaaaagaaacagtaaaagag
gcaatcaaacatccacgtgcaattaatttaaatcttgttgatgcacaacaagcaagaaga
atacttgatagaattgtaggttataaactttctccgattttatggaaaaaagttaaaaac
ggtttatcagcaggaagagttcaatcagctgcattgaaacttataattgatcgtgaaaat
gaaataagaaagtttattccagaagaatattggagtatagattttgttgcaactcataac
aaaattgatttcactggggattttattggagaatatatagataacaaaattaaaaatatt
aaattaactaatgaaaatgatgttgataatataatatctaaaatagataaggacaatttt
aagattattgataaggatgtaaaggaaaaaagtagaaaaccatacgaaccttttactaca
tcaacattacaacaagaagcatctaaaagaatatacttttcaacttcaaaaacgatgtct
gttgcacaacaactatacgaagggataaatgttggtgaaggatctgttggactaatatca
tatatgagaacagattctacaagactttcaaatgggataattgatgaagcaatttcatat
attaatgaaaattatggtaaagaatatgcttcaaaaggaaggtcatataataagaagaaa
agtggttcacaggatgcccatgaagctgtaagagtttcatcaatttataggacacctgaa
aaaataagagattatttaactactgatcaatataaattatatagattaatatgggaaaga
acacttgcatcacaaatgaaagatagtaaatatttatctactagatatgattttgaaagc
aatggtattttatttagagcaaatggttcgatagttacttttgatggattttcaaaagtt
tggaccattgctgataaaaaagttgagcttcctaattttgaaattggagatgtattttca
gcatctaaaattaataaggaaaagcattttacaaaaccaaaggctagatttacagaagct
tcattagtgaaggaattagaaaaaaatggtattggtagaccttcgacttattcatcaata
attaaaagtttattgagtagatattatgttgaatttgaagaaaaatcactagtacctaca
gaaataggatttactgttattgaattattattacaatatttcaagacgataataaatgaa
gattttacagctgagatggaaaatagtttagataaaattgaagaatcagatgttgaatgg
agaaaattaattaaagatttttatgataaatttgatgaactgttgaaaaaagctgaaaat
tcaagtaaagattttgaaattaaagataaaccaactggagaaaaatgtccggaatgtgga
gaagacttactttataaaaaaggaagaaatggagattttattggttgctctaattttcct
aaatgtacattcactaaaaacattgtaaaagaattgggtatagtctgtcctaaatgtggt
ggaaaaataattgaaaaaatctcaaaaagaggaaaagttttttatggctgtgaaaattat
cctcaatgtgattgggcttcttgggataaaccaacaggagaaaaatgtgcagaatgtggt
gatttaatggttcatagaaaaaatagaaaaatggatgcaattatttgcaataatgaaaat
tgtataagaaataaataa
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