Helcococcus ovis: EQF90_003775
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Entry
EQF90_003775 CDS
T09706
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hov
Helcococcus ovis
Pathway
hov03410
Base excision repair
hov03430
Mismatch repair
hov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQF90_003775 (recJ)
03430 Mismatch repair
EQF90_003775 (recJ)
03440 Homologous recombination
EQF90_003775 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hov03400
]
EQF90_003775 (recJ)
DNA repair and recombination proteins [BR:
hov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EQF90_003775 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EQF90_003775 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EQF90_003775 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
MG1
Motif
Other DBs
NCBI-ProteinID:
WNZ01964
LinkDB
All DBs
Position
797298..799034
Genome browser
AA seq
578 aa
AA seq
DB search
MENWYLINKIENYNKIKDKKNITSFQKILLANRDITDAYKIDSIFNSNIDNLHSPLLMRD
MQKGVDVLFDSMMKNEKIMISGDYDQDGVAATVILYKGIKLFYENVLYSIPDRIEDGYGL
NKNIVDDCIENNVKLIITCDNGIAAFEAIDYAKKNNIRVIVTDHHEVVNIDGVDNLPNAD
AVINPHRMDDDYPFDDICGAVVAYKFIDAIIELYGKNIGLEKKSIYFLLQFAMLGTVCDM
MKIVDENRIIVIEGLRLINKTNNIGIKSLLNEIKWEKPVDIYTVGFLIGPIINASGRIYT
AKLGVELFLTDNIDEANTYSKTLVELNDERKEMTQKSVELAIENIEYENIHKNDIIVVYD
SSIHESICGLVAGRVKDKYNKPTLILTDSSNEGILKGSGRSISAYNMFEKFNNFRDEFVA
FGGHAMACGLSIEKEKLKSFNEKIQLDSNLVEDDFNKSIDLDYCLNFKNINKNLINQINE
LSPYGYGFSEPIFASKNVFVRDIFLLGKDKNVLKIKFEQDGILLDAINFRIDEILDKLEI
NIDDIYKIKNKNYDIVYKIGENTFNGYTSIQLNLISMR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattggtatttaataaataaaatagaaaattacaataaaataaaagataaaaaa
aatattacaagttttcaaaaaatattattagctaatagagacataactgatgcttataaa
atagatagcatatttaattcaaatattgataatttacattctcccttattgatgagagat
atgcaaaagggggttgatgtattatttgattctatgatgaaaaatgaaaaaataatgatt
tccggtgattatgatcaagatggtgtagctgcaactgtaatactttataaaggaattaaa
ttattttatgaaaatgtgttatactcaatacctgataggattgaagatggttatggatta
aataaaaatattgtagatgattgtattgaaaataatgttaaattaattataacatgtgat
aatggaatagcagcttttgaagcgatagattatgcaaagaaaaataatattagagttata
gttactgatcatcatgaggttgtaaatatagatggagttgataatcttccaaatgctgat
gcggtaattaatccgcatagaatggatgatgattatccttttgatgatatatgtggagct
gtagttgcttataaatttatagatgcaattattgaactgtatggtaaaaatattggatta
gaaaagaaaagtatatattttcttcttcaatttgcaatgcttgggacagtttgtgatatg
atgaaaatcgttgatgaaaatagaataatagttatcgaagggttaaggcttataaataaa
actaataatataggaataaaatccttgttaaatgaaattaaatgggaaaagccggtagat
atatacacagtaggttttttaattggtcctattataaatgcaagtggaagaatttataca
gcaaaattgggtgttgaactttttttaactgacaacattgatgaggcaaatacatattct
aaaaccttagttgaattaaacgatgaaagaaaagaaatgactcaaaaatctgtagaattg
gcaattgaaaatattgaatatgaaaatatccataaaaatgatataattgttgtatatgat
tcaagtattcatgaaagtatttgtggacttgttgcaggtagggtaaaagataagtataat
aagcctacattaattcttactgattcttcaaatgaaggtatcctaaaaggctcaggtaga
agtataagtgcatataatatgtttgaaaaatttaataattttagggatgaatttgttgct
tttggcgggcatgcaatggcatgtggcttgagtatagaaaaagaaaaattaaagtctttt
aatgaaaaaattcaattggatagcaatctcgtggaggatgattttaataagtcaatcgat
ttagattattgtttgaattttaaaaatataaataaaaacttaatcaatcaaataaacgag
ctaagtccatacggttatgggttttctgaacccatatttgcaagtaaaaatgtttttgta
agagatatatttttacttggaaaagataaaaatgtattaaagattaaatttgagcaagat
ggcattttattggatgcgataaatttcagaattgatgaaatacttgataaattagaaatt
aatattgatgatatatataaaattaaaaataaaaattatgatatagtttataaaattgga
gaaaatacttttaacggatacacgagtattcaattaaatttaatctcaatgaggtaa
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