Helcococcus ovis: EQF90_003895
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Entry
EQF90_003895 CDS
T09706
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hov
Helcococcus ovis
Pathway
hov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EQF90_003895 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hov03400
]
EQF90_003895 (xseA)
Enzymes [BR:
hov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EQF90_003895 (xseA)
DNA repair and recombination proteins [BR:
hov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EQF90_003895 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WNZ01988
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All DBs
Position
822518..823699
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AA seq
393 aa
AA seq
DB search
MKKLNAITVKQLSKYLKSVIKEDFILNNIFIVGEIVNLRVTMFSYFSLKEDDETISCVKF
DNDFDFSDGDKVLIKGYLNLYTKDSRYQIIVKDVQEYGVGESSIILKKLKEKLLKKGYFD
NDNKKNIPNIPYKIGLITGLNSAAYYDFFKVLSDNNYNCQVYYYNSLVQGKSAEIDIVNG
LDILDKYKLDLIVLTRGGGSKEDLSIFNSELIADKIFELNTPIITAIGHDIDLSISDLVS
DKFLSTPTKAAEYIVRQNVKYKENLYNINRFINQNIQNIIANFEKSLKLINSKIELNNPK
NIILEREYYFNNRKNKINYLINYLITDYEKRLYYTRNKIENLFNNILNNKSIYIKNDSRK
YIDIKDIKVGEKYIIFNKDISFKITVEEKIDEW
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaactaaatgctataactgtcaaacaactaagtaaatacttaaaatcagttatc
aaagaagattttatattaaacaatatttttattgttggagaaattgttaatttaagagtt
actatgttttcttatttttcattaaaagaggatgatgagacaatttcttgtgtaaagttt
gataatgattttgatttcagtgatggggataaggttttaattaaagggtatttaaattta
tacacaaaagatagtagatatcaaattattgtaaaagatgtacaagaatatggagttggt
gaaagtagcataattttaaaaaaacttaaagaaaaattactaaaaaaaggatattttgat
aatgataataaaaaaaatattcccaatattccatataaaataggtcttattaccggatta
aattcggcagcatattatgatttttttaaggttctaagtgataataattataattgtcaa
gtttattattataattcgcttgtacaaggaaaaagtgcagaaattgatatagttaatgga
cttgatatattagataaatataagcttgatcttattgtacttacgagaggtggaggatca
aaagaagatttatcaatatttaacagtgaattaattgctgataagatttttgagttaaat
actcctataattactgctattggtcatgatattgatttaagtatttcagatttagtaagc
gataaatttttgtctactccaactaaagctgctgaatacattgtaagacaaaatgtaaaa
tataaagaaaatttatacaacattaatagatttataaatcaaaatattcaaaatataatt
gcaaattttgaaaaatcattaaaactgataaattcgaaaattgaattaaataatccaaaa
aatattattcttgaaagggaatattattttaataacagaaaaaataaaatcaattattta
attaattatttgattactgattatgagaaaagattgtattatacaagaaataaaatagag
aatctatttaataatattcttaataataaaagtatttatattaagaatgattcacgtaaa
tatatagatattaaagatataaaagttggcgaaaaatatattattttcaataaagatata
tcatttaagattacagttgaggagaaaattgatgaatggtaa
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