Helcococcus ovis: EQF90_004085
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Entry
EQF90_004085 CDS
T09706
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hov
Helcococcus ovis
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hov03016
]
EQF90_004085 (truB)
Enzymes [BR:
hov01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EQF90_004085 (truB)
Transfer RNA biogenesis [BR:
hov03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EQF90_004085 (truB)
Prokaryotic type
EQF90_004085 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Thump_like
DUF7037
Motif
Other DBs
NCBI-ProteinID:
WNZ02025
LinkDB
All DBs
Position
complement(868034..868924)
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AA seq
296 aa
AA seq
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MKMGILVVNKAKGMTSHDVVAILRRKLNIKKVGHTGTLDPMATGVLPICIGNATRVSDYI
MNQGKSYIATLKFGEATTTYDFEGEITNKSDNKIFQVNEVKNVLEGFKGIIEQTPPIYSA
LKVNGKKLYQYAREGKEVEIKKRNVKIYDIKLLELSNEYAKIEVSCSKGTYIRSLIHDIG
LKLNTFAHMTDLIRNRVGKFELINAIDISKINELNFEEILENVIPAEKCLYNLGQINILE
DLKFRLINGQRVNIKTIKYNGIFNQNKDIVVSVNNDFIGIGKIKNNILKMEKVLCQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggggatcttagtcgttaataaagctaagggaatgacctctcatgatgttgtt
gctattttaagaagaaaattaaatataaaaaaagtaggacatactggcacattagatcca
atggcaacaggtgtcctaccaatctgtattggtaatgctacaagagtaagtgattatata
atgaatcaaggcaagtcatatatagcgactctaaaatttggagaggctactacaacttat
gattttgaaggtgaaataactaataaatcagataataaaatttttcaagtaaatgaagtt
aaaaatgtattggagggttttaaaggaataattgaacaaactcctccgatttactcagca
ttaaaagtaaatggaaaaaagttatatcaatatgcaagagaaggaaaagaagttgaaatt
aaaaaaagaaacgtaaaaatatatgatataaaacttcttgaattatccaatgaatatgca
aaaatagaagtttcatgttctaagggaacatatataagatcactaattcacgatattgga
ttaaaactaaatacttttgctcatatgactgatttaattagaaatagagtaggtaaattt
gaattaattaatgcaatagatatttctaaaattaatgaactaaattttgaggaaatatta
gaaaacgttatccccgccgaaaaatgtttatataatttagggcaaataaatattttagaa
gatttaaaatttagattaattaatggacaacgagtaaatataaaaactataaaatacaat
ggtatttttaatcaaaataaggacatagtagtgtctgtaaataatgattttataggaata
ggtaaaattaaaaataacatattaaaaatggagaaagtattatgtcaataa
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