KEGG   Helcococcus ovis: EQF90_004120
Entry
EQF90_004120      CDS       T09706                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
hov  Helcococcus ovis
Pathway
hov03030  DNA replication
hov03430  Mismatch repair
hov03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hov00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EQF90_004120
   03430 Mismatch repair
    EQF90_004120
   03440 Homologous recombination
    EQF90_004120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hov03032]
    EQF90_004120
   03400 DNA repair and recombination proteins [BR:hov03400]
    EQF90_004120
Enzymes [BR:hov01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EQF90_004120
DNA replication proteins [BR:hov03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EQF90_004120
DNA repair and recombination proteins [BR:hov03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EQF90_004120
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP HHH_6 DEDDh_C HHH_3 RNase_H_2 tRNA_anti_2 Laminin_B
Other DBs
NCBI-ProteinID: WNZ02032
LinkDB
Position
complement(874329..878528)
AA seq 1399 aa
MQFIEFLEEYNKNNKTKLFLDEVSFFKIENELNIKLLSKEDVNIDDIKKYFNKVLENYEV
NIEISLFTLKEIFDYFSEVFPSLRYEYNDPKFTIFLLHINQKQFYETKDIFIRFRDKVSK
LDIEVEFLENNIDNKDVIEEIAKKREEEILLQIKKAKEKEDRKQEKEVVKKASENGEMFS
YGFTKGIPANFTELEDLVNDTNKVKVKGKVYDLESRTVKSGCFIKFSLDNGYYAISCKIF
VRSDKIEDFLANFKNGMDVILSGIYAFDEWEKSSILNVTSIEQTILPVRQDLSKEKRIEF
NIHTKYTNSESVVDISSLFKTLKTWGHENVGVSDLFNVQAYPEIYKVAKSNGIKLNLGLQ
TNFIDSEMTILRNYYNLPLDNKDYVVFDLETTGLSNFTDKIIEFGAVKIRNGEIIEVFEE
FVNPKEPLSEFTTELTGITNDMVVNADTIDIVLPKFLEFTKNTILVAHNAEFDVEFILAK
TSEVGLEFKPVYADTMYISRALNPNLKNHKLDTLTKHYKVNLLNHHRASDDAKATAEVFI
KMLKQLDELNIKFNQNINKMDITFDVAQHKEYQGLLYVQNKIGLKNLYIIVSKSNLEYYH
RNPSIPLDILESLREGILIGTGNYKSRLFNLISLGYDDEILLNEAKFFNFISLIPLDFSD
HLIKRGYIRNEDHLKNINKKLIEIAEIINIPAIAMGDVYYIDKKDYPFRNVLKNYPRKRS
QENSGAFYLKNTQEMLNEFSYLGVEKAYEVVVTNSYKLNNMIENISPIADGTFPPNVEKA
VERLQTESFEKARAIYGQTLPQLVENRLNRELNSIIGNGYASLYVIAQELVRESNRQGYL
VGSRGSVGSSFAATMADITEVNPLPAHYICENCKHVEFNEDERYSCGVDLPDKICPKCSS
KMIKEGFDIPFEVFLGFEGDKEPDIDLNFASVYQSKIHKYTEKFFGPGKVFRAGTLGTIA
EKTAYGMARKYKEYYPDDEKIQLDNANINRVKRYITGVKRTTGQHAGGLIIVPDNKDIED
FTPVQYPADKKETGIITTHFDYHAIDKNLLKLDLLGHNAPTIIRLLSDKSGVNAVKVPLD
DKDTMSIFSSTDKLNIKHEYTNIKDGSLGIPEFGTNFVRGMLADTKPTTFEELIRISGLS
HGTDVWLGNAQELIRQGICNLKSAICTRDDIMNYLIEKGLDKKLAFDIMEKVRKGKGVSD
DQIKEMKKCSVPDWYIDSCQKIQYMFPKAHAVAYVMMSFRIAYFKVHHPAYFYAVYFTNA
ISDFKYTHISRGLDYMTSFINTLKSQDNVDINNEFYCYELAEEMYARDIKMEKVDLYKSH
PLEFEVIDDNTILAPLMAMENISESMAIRIAEARKSGEFISKEDFINRTKINKTAVETLE
NAGVFDGMQDTNQIDFFNM
NT seq 4200 nt   +upstreamnt  +downstreamnt
atgcaatttatcgaatttttagaagaatataataaaaacaataaaacgaaacttttttta
gatgaagtttcgttttttaaaattgaaaatgaacttaatataaagcttctttcgaaggaa
gatgtgaatattgatgatataaaaaaatattttaataaagtgttggaaaattatgaagta
aacattgaaatatcattatttacattaaaagaaatatttgactatttttcagaagttttt
ccttcattgagatatgaatataatgatccgaaatttactatatttttattacatattaat
caaaagcaattttatgaaactaaagatatttttataagatttagggataaagtttcaaag
ttggatatagaagtagaatttttagaaaataacattgataataaagatgtaattgaagaa
attgcaaaaaaaagagaagaagaaatattactacagataaaaaaagctaaagaaaaagaa
gataggaaacaggaaaaagaagtagttaaaaaagcttctgaaaatggagaaatgttttct
tatggttttacaaaaggtatacctgctaattttaccgaactagaggatttagttaatgat
acaaacaaagttaaagttaaaggaaaagtatacgatcttgaaagtagaactgttaaatcc
ggttgttttattaagttttccttagataatggctattatgcaatttcatgtaaaatattt
gtaagaagtgataaaattgaggactttttagctaattttaaaaatggtatggatgtaatt
ttgtcgggaatttatgcatttgatgagtgggaaaaatcatctatattaaatgttacaagt
attgaacaaacaattttacctgttagacaagatttatcaaaagaaaaaaggatagagttt
aatattcataccaaatatacgaattcagaatctgtagtcgatatttcatctctatttaaa
acattaaagacttgggggcatgaaaatgtaggtgtatctgatttatttaatgtgcaggca
tatcctgaaatttataaagtagcaaaatctaatggtattaagcttaacctaggattgcaa
actaattttattgattcagagatgacaatacttagaaattattataatttacctcttgat
aacaaagactatgttgtatttgacttggaaacaacaggattgtcgaattttacagacaaa
attatagagtttggtgcagtaaaaataagaaatggtgaaataatagaagtttttgaagaa
tttgtaaatccgaaggaaccattaagtgaatttacaactgaattaacaggtattacaaat
gatatggttgtaaatgccgatacaattgatattgtgctacctaaatttttagaattcaca
aaaaacacaattttagttgctcataatgcagaattcgatgttgaatttattttagctaaa
acaagtgaagtaggtttagaatttaagcctgtttatgctgatacaatgtatatttcaagg
gcattaaatcctaatttaaaaaatcataaattggatactctaacaaaacattataaggta
aatttactaaaccatcatagagcttctgatgatgctaaagcaacagcagaagtatttata
aaaatgttaaaacaactcgatgaattgaatattaaatttaatcaaaatattaataaaatg
gatataacatttgatgttgctcaacataaagaatatcaaggattattatatgtacaaaat
aagataggattaaaaaatttatatataatagtgtcgaaatcaaatttagaatactatcat
agaaatccaagtataccattagatattttagaaagtttgcgagaaggaattttgatcgga
accggtaactataaaagtagattatttaatttaatttcacttggatatgatgatgaaata
ttgttaaatgaagctaaattctttaattttatttcattaattcctcttgatttcagtgat
catttaattaaaagaggttatatcagaaacgaagatcatcttaaaaatattaataaaaaa
ttaatagaaattgctgaaataataaatattcctgcgattgctatgggagatgtttactat
attgataaaaaagactatccttttagaaatgtattaaaaaattatccaagaaagagaagt
caggaaaattctggggctttttacttaaaaaatactcaggaaatgttaaatgaattttca
tatctaggcgttgaaaaagcttatgaagttgtagttacaaattcatataaattaaataat
atgattgaaaatatttcgcctattgcagatggtacatttccacctaatgtagaaaaagct
gttgaaagattacaaacagaatcgtttgaaaaagcgagggcaatatatggtcaaacacta
ccacaattagttgagaatagattaaatagggagttaaattctattataggaaatggatat
gcttcattatatgtaattgctcaagaacttgtaagggaatctaatagacaaggttattta
gtaggttctagaggtagtgtaggatcaagttttgcagcaacaatggcagatattacagaa
gtaaatcctcttcctgcacattatatatgtgaaaactgtaaacatgtagaatttaacgaa
gatgaaagatattcttgtggtgttgatttacctgataaaatttgtccaaaatgcagtagt
aagatgattaaagaaggttttgatattccatttgaagtattcttaggatttgaaggagat
aaagaacctgatattgacttgaactttgcatctgtttatcaatcaaaaatccataaatac
acagaaaaattctttggacccggtaaagtatttagagctggtactttaggtacgattgct
gaaaaaactgcatatggtatggcaagaaaatataaagaatactaccctgatgatgaaaaa
attcaacttgataatgcaaatataaatagagtaaaaagatatattaccggtgttaaaaga
acaacgggacagcatgccggtggtcttattattgtacctgataataaagatattgaagat
tttacacctgtgcaatatccggcagataaaaaagaaacaggaattataactactcatttt
gattatcatgcaatagataaaaacttattaaagcttgatttacttggacataatgctcca
actattattagattattgtcggataaaagtggagtaaatgctgtaaaagttcctttggat
gataaggatacaatgagcatattcagctcaactgataaacttaatatcaaacatgaatat
acaaatattaaagatggttctcttggaataccagaatttggtacaaattttgttcgtggt
atgctagcagatactaaacctacaacatttgaagagttgatacgtatttcagggttatca
cacggcacagatgtatggttaggaaatgctcaagaactaattagacagggaatttgtaat
ttaaagagtgcaatatgtactcgtgatgatattatgaactatttaatagaaaaaggattg
gataaaaaacttgcatttgatattatggaaaaagttagaaaaggtaaaggcgtatctgat
gatcagattaaggaaatgaaaaaatgtagtgtgcctgactggtatattgactcatgtcag
aaaatacaatatatgtttcctaaagcacatgctgtggcatatgttatgatgagttttaga
atcgcatattttaaggtacatcatccagcatatttttatgctgtatattttacaaatgca
atttctgattttaaatatacacatatttcaagaggacttgattatatgacttcatttata
aatacattaaaatctcaagataatgttgatataaataatgaattttactgttatgaactt
gcagaggaaatgtatgctagagatataaagatggaaaaggtagatttatacaaatcacat
cctttagaatttgaagtaattgatgataatactattttagcacctcttatggcaatggaa
aatatttctgaatcaatggctattagaattgcagaagctagaaaatccggagaattcatt
tctaaagaagattttataaatagaactaaaattaacaagacagctgtcgaaacacttgaa
aatgcaggtgtttttgatggcatgcaagatacaaatcaaattgacttttttaatatgtaa

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