Helcococcus ovis: EQF90_006910
Help
Entry
EQF90_006910 CDS
T09706
Name
(GenBank) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hov
Helcococcus ovis
Pathway
hov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQF90_006910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hov03400
]
EQF90_006910
Enzymes [BR:
hov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EQF90_006910
DNA repair and recombination proteins [BR:
hov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EQF90_006910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
FAM91_C
Motif
Other DBs
NCBI-ProteinID:
WNZ00991
LinkDB
All DBs
Position
complement(1456715..1457611)
Genome browser
AA seq
298 aa
AA seq
DB search
MKYIIEKKEDYLLIKGLKDFNLTHIFECGQAFRWEKTQDQSYIVIAFGKVIELKHDVNGD
LIVFNSSENDFINIWHNYFDLNRDYSKLKNDLKLTRAYSKNDSLKDAMNFGYGIRILNQE
KFETIISFIISANNQIPRIKNSIRLLSENYGEFIEEYKGNKYYSFPKAEVLAKADPEEVK
EICRVGFRNTRIVDCSEMYIGTPEIFDENLDDLTLGNNLLTVPGIGPKVRDCILLFGYAR
GETFPVDVWVKRLMETLYIGNTLPNSKILEEGTNYFGKLRGYAQQYLFYYARENKIGK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattatagaaaaaaaagaagattatttattaattaaagggcttaaggacttc
aatttaactcatatttttgaatgtggacaagcatttagatgggaaaaaacgcaagatcaa
tcctatattgttatagcatttggaaaagttatagaattaaaacatgatgtaaatggagat
ttaattgtttttaattcttcggaaaatgattttataaatatttggcataattattttgat
ttgaatagagattattctaaattgaaaaatgatttaaaactcacaagagcatattctaaa
aatgatagtcttaaagatgccatgaattttggatatggtattagaattttaaatcaggaa
aaatttgaaacgataatttcgtttataatttcagctaacaatcaaattcctaggataaaa
aattcaataagattattatcggaaaattacggagaatttatcgaagaatataaaggtaat
aaatattattcatttccaaaagctgaagttttagcaaaagctgaccctgaagaagttaaa
gaaatatgcagggttggatttaggaatacaaggatagttgattgctctgaaatgtatata
ggtactccggaaatttttgatgaaaatttagatgacctcacattgggcaataatctattg
acagttccgggtataggaccgaaagttagagattgtatattattatttggatatgcaaga
ggtgaaacatttcctgtcgacgtttgggtaaaaagattaatggaaactttgtatattgga
aatactctacctaatagtaaaattttagaagaaggtacaaattattttggaaaacttaga
ggatatgctcagcaatatttgttttattacgcaagagaaaataaaattggaaagtag
DBGET
integrated database retrieval system
