Helicobacter pylori HPAG1: HPAG1_0225
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Entry
HPAG1_0225 CDS
T00365
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hpa
Helicobacter pylori HPAG1
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_0225
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPAG1_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
AAA_24
NTPase_1
AAA_14
RecA
AAA_16
Rad51
ATPase_2
AAA_31
ABC_tran
NACHT
SLFN-g3_helicase
AAA_5
nSTAND3
AAA_22
CbiA
DUF7129
GvpD_P-loop
DAP3
zf-C2H2_7th_ZNF462
ArsA_ATPase
NPHP3_N
ResIII
Zeta_toxin
AAA_30
AAA
SRP54
MeaB
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABF84292
LinkDB
All DBs
Position
228392..229762
Genome browser
AA seq
456 aa
AA seq
DB search
MILKKSGILAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQAQKEVLNTLKNPIP
KAQKSVSIAAIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASG
LAKNQQKVLYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKANIESENYFACVID
SIQTLYSPEISSAPGSISQVREITFELMRLAKTRNIAIFIIGHITKEGSIAGPRVLEHMV
DSVLYFEGDPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGS
AITITLEGSRALILEIQALVSECSFGSPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDV
FINVSGGIKISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKE
MENYGFLKAILPKKPSQKTSIKCYEANAVGKIVEWM
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgattttaaaaaagagtggtattttggctaaaaaaacttctttatttgagtgtcagcat
tgcggttttacaagccctaagtggctaggcaagtgcgttcaatgcaacgcatgggagagt
tttatagaattgaaccaagctcaaaaggaagttttaaacacgcttaaaaatccgatccca
aaagcgcaaaaaagcgtttctatcgctgcaattgagcatgaagaagtgattaagttttct
tccactcaaagcgaattagatattgttttaggtggggggatcgctaaaggggggttgtat
ttagtgggggggagtcctggggtggggaaatccactctgcttttaaaagtggcttctggc
ttagccaaaaaccagcaaaaggttttgtatgtgagcggggaagagagcttgagccagatt
aaaatgcgcgccactaggttggattgcatagaaaaagaattgtatttgctcaatgaaatc
aattggcctgtgattaaggctaatatagaaagcgaaaattattttgcgtgcgtgattgat
tccattcaaacgctttattcgccagagatttcttcagcgcccggctctatttcgcaagtg
cgagagatcacttttgagctcatgcgtttggctaaaacaagaaatattgctatttttatc
atcggtcatatcactaaagaagggagtattgcagggcctagagtgctagagcatatggtg
gatagcgtgctgtattttgaaggcgatcccagtagggaattaaggattttaaggagtttt
aaaaaccgctttggccctacgagtgaaatcggcttgtttgagatgaaagagcagggtttg
gtgagcgctaaagaagcttcaagtttgtttttttcaaaagaagagcctatggaggggagt
gccattaccatcactttagaaggctcaagagcgttgattttagagattcaggcgttggtg
agcgaatgcagtttcggatcgcccaaacgattagcgaacgggtttgacaccaaccgcctt
aacatgctcatcgctttgttagaaaaaaagctagaaatccctttaaaccgccatgatgtg
ttcattaatgtgagcgggggcattaagattagcgagccggcttgcgatttagcggtcatt
gccagtatcctttcaagctttaaaaacagaaagattgacaataaaacggcgtttttgggc
gaagtgagtttgaatggtaggattttagaagcccctaatttgaacgctagattgaaagaa
atggaaaattatggctttttaaaagccattttgcctaaaaaacccagtcaaaaaacctct
atcaaatgctatgaagccaatgcggtggggaagattgttgaatggatgtga
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