Helicobacter pylori HPAG1: HPAG1_0388
Help
Entry
HPAG1_0388 CDS
T00365
Name
(GenBank) Holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPAG1_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_0388
Enzymes [BR:
hpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPAG1_0388
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPAG1_0388
RecFOR pathway proteins
HPAG1_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
DUF815
AAA_3
TIP49
nSTAND3
RNA_helicase
AAA_2
AAA_14
Sigma54_activ_2
bpMoxR
Bac_DnaA
MCM
Rad17
DUF3738
HAMP_2
AAA_PrkA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABF84455
UniProt:
Q1CUB7
LinkDB
All DBs
Position
complement(397668..398678)
Genome browser
AA seq
336 aa
AA seq
DB search
MKERIVNLETLDFETSQEVSLRPSLWEDFIGQEKIKSNLQISICAAKKRQESLDHMLFFG
PPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAI
EEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQ
FYSPSELALIIKKAAIKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEP
FLLANGYLERTAKGRIATPKTHALLKIPTLKSQTLF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacggatagtcaatttagaaactttggattttgaaacttctcaagaagtgagt
ttgcgccctagtctttgggaagattttattggtcaagaaaagattaaaagcaacttgcaa
atttctatttgcgcggctaaaaaacgccaagaaagtttggatcacatgctcttttttggc
ccgcccggtttgggtaaaacttcaatcagccatatcatcgctaaagaaatggaaaccaat
atcaaaatcaccgccgctcccatgatagaaaaaagcggtgatttggccgccattttgacg
aatttgcaagctaaagacattctttttattgacgaaatccaccggctcagcccagcaatt
gaagaggttttatacccggcgatggaagattttaggttggatattatcataggctcaggc
ccagccgctcaaaccattaagattgatttaccccctttcaccctcatcggcgctaccact
agagccggaatgctctctaaccccttaagagacagatttggcatgagttttaggatgcaa
ttttatagccctagcgaattagcccttatcatcaaaaaagccgccattaaactcaaccaa
gacatcaaagaagaaagcgctgatgaaatcgctaaaaggagtagaggcacgccaaggatc
gctttaaggcttttaaaaagggtgcgcgattttgcgttagtcaaaaattcaagcttgatg
gatttaaacatcactttgcatgctttgaatgaattaggcgtgaatgaattgggctttgat
gaggcggatttggcgtatttatctttgttggctaacgctcaaggacggccggtgggtttg
aacacgattgcagcatctatgagagaagatgaaggcacgattgaagacgtgattgagcct
tttttactcgctaatggttatttagagcgcaccgctaaaggcagaattgctacgcccaaa
acccatgcacttttaaaaatccccactttaaagtctcaaactttattttaa
DBGET
integrated database retrieval system
