KEGG   Helicobacter pylori HPAG1: HPAG1_0647
Entry
HPAG1_0647        CDS       T00365                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hpa  Helicobacter pylori HPAG1
Brite
KEGG Orthology (KO) [BR:hpa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HPAG1_0647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpa03019]
    HPAG1_0647
   03009 Ribosome biogenesis [BR:hpa03009]
    HPAG1_0647
   03036 Chromosome and associated proteins [BR:hpa03036]
    HPAG1_0647
Enzymes [BR:hpa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HPAG1_0647
Messenger RNA biogenesis [BR:hpa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPAG1_0647
Ribosome biogenesis [BR:hpa03009]
 Eukaryotic type
  90S particles
   RNase
    HPAG1_0647
 Prokaryotic type
  rRNA processing factors
   HPAG1_0647
Chromosome and associated proteins [BR:hpa03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HPAG1_0647
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2
Other DBs
NCBI-ProteinID: ABF84714
LinkDB
Position
674565..675287
AA seq 240 aa
MMKNKRSQNSPYVTPNNPYTTLEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDA
VLGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISNGR
EKPSILSSAFEALMAGVYLEAGLAKVRKIMQNLLNRAYKRLDLEHLFMDYKTALQELTQA
QFCVIPTYQLLQEKGPDHHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYYALQKLKEAK
NT seq 723 nt   +upstreamnt  +downstreamnt
atgatgaaaaacaaacgctctcaaaacagcccttatgtaacgcctaataacccttataca
acgctagaaaaagctttggggtattcttttaaagacaagcgtttattggagcaagcctta
acgcataaatcatgcaagctcgctttaaacaatgagcgcttggaatttttaggcgatgcg
gtgttgggtttggtgataggggagttgctataccataaattctaccaatacgatgagggc
aaactctctaaattaagggcttctattgtgagcgcgcatggttttacgaaattagcgaaa
gcgatcgctttgcaagattatttgcgcgtttcttcttctgaagaaatttctaatgggaga
gaaaaaccctctattttatcaagcgcttttgaggctttaatggccggggtgtatttagaa
gcggggttagctaaggtgcgcaaaatcatgcaaaatttactcaatcgcgcttacaagcgt
ttggatttggagcatttgtttatggactataaaaccgctttgcaggaattaacccaagcg
caattttgcgtgatccccacttaccaattgctccaagaaaaaggccccgatcaccataaa
gaatttgaaatggctctatacattcaagataaaatgtatgcgaccgctaaaggcaaaagc
aaaaaagaagccgaacagcaatgcgcttattatgcgcttcaaaaactgaaggaagccaaa
tga

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