Helicobacter pylori HPAG1: HPAG1_0876
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Entry
HPAG1_0876 CDS
T00365
Name
(GenBank) outer membrane protein BabA
KO
K15847
outer membrane protein BabA
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa05120
Epithelial cell signaling in Helicobacter pylori infection
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05120 Epithelial cell signaling in Helicobacter pylori infection
HPAG1_0876
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
RmuC
Motif
Other DBs
NCBI-ProteinID:
ABF84943
LinkDB
All DBs
Position
complement(913627..915861)
Genome browser
AA seq
744 aa
AA seq
DB search
MKKHILSLTLGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVKNTKGIQELSDNYENLSNLL
TRYSTLNTLIKLSADPSAVNAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVV
GYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGHMPGYYGPMSIENFKKLNEAY
QILQTALKNGLPALKENNGTVNVTYSYTCSGEGNDNCSLQTTGVTNQNNGTKTETQTIDG
KSVTTTISSKVVDSQAYGNTTGVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYF
HANNSSEANAPKFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPIGNN
NGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGNFKNFVTGFLATCNN
PSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
VNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQI
QTINQELGRNPFRKVGIVGSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEY
VNLATVNNVYNAKMNVANFQFLFNMGVRMNLARPKKKGSDHAAQHGIELGVKIPTINTNY
YSFMGAELKYRRLYSVYLNYVFAY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacatcctttcattaactttaggatcgcttttagtttccactttgagcgct
gaagacgacggcttttacatgagtgcgggctatcaaatcggtgaagccgctcaaatggtg
aaaaacaccaaaggcattcaagagctttcagacaattatgaaaacttgagcaatctttta
acccgatacagcaccctaaacacccttatcaaattgtccgctgatccgagtgctgtcaat
gcggctcgtgaaaatctgggcgcgagcgcgaagaacttgatcggcgataccaaaaattcc
cccgcctatcaagccgtgcttttagcgatcaacgcggcggtggggttttggaatgtcgta
ggctatgttacgcaatgcgggggtaacgctaatggtcaaaaaagcacctcttcaacaacc
atcttcaacaacgagccagggtatcgatccacttccatcacttgctctttgaacggacat
atgcctggatactatggccctatgagcattgaaaatttcaaaaagcttaacgaagcctac
cagatcctccaaacggctttaaaaaacggcttgcccgcgctcaaagaaaacaacggcacg
gtgaatgtaacctacagctacacatgctcaggggaagggaatgataactgctcgctacaa
accacaggtgtaaccaatcaaaataacggaaccaagactgaaacccaaaccatagacggc
aaaagcgtaaccaccacgatcagttcaaaagtcgttgatagccaagcatatggtaataca
acaggagtctcctacaccgaaatcactaacaaattagacggtgtgcctgatagcgctcaa
gcgctcttagcgcaggctagcacgctcatcaacaccatcaacacggcatgcccgtatttc
catgctaataatagtagtgaggctaacgccccaaaattctctactactactgggaaaata
tgcggcgctttttcagaagaaatcagcgcgatccaaaagatgatcacggacgcgcaagag
ctggtcaatcaaacgagcgtcattaacgagcatgaacaatcaaccccaataggcaataat
aatggcaagccattcaaccctttcacagacgctagctttgcgcaaggcatgctcgctaac
gctagtgcgcaagctaaaatgctcaatttagcccatcaagtggggcaaaccattaaccct
gacaatcttaccgggaattttaaaaattttgttacaggctttttagccacatgcaacaac
ccctcaacagctggcactggcggcacacaaggttcagctcctggcacggttaccactcaa
actttcgcttccggttgcgcctatgtggaacaaaccataacgaatctaaccaacagtatc
gctcattttggcactcaagagcagcagatacagcaagccgaaaacatcgctgacactcta
gtgaatttcaaatctagatacagcgaattagggaacacttataacagcatcaccactgcg
ctctccaaagtccctaacgcgcaaagcttgcaaaacgtggtgagcaaaaagaataacccc
tatagcccacaaggcatagaaaccaattactatctcaatcaaaattcttacaaccaaatc
caaaccatcaaccaagaactcgggcgtaacccctttaggaaagtgggtattgttggttct
caaaccaataacggcgccatgaatgggatcggtatccaggtgggctataagcaattcttt
ggccaaaaaagaaaatggggcgctaggtattacggcttttttgattacaaccatgcgttt
attaaatccagcttcttcaactcggcttctgatgtatggacttatggctttggagcggac
gctctctataacttcatcaacgataaagccaccaatttcttaggcaagaacaacaagctt
tctgtggggctttttggaggcattgcgttagcgggcacttcatggctcaattctgaatac
gtgaatttagccaccgtgaataatgtctataacgctaaaatgaatgtggcgaatttccaa
ttcttattcaacatgggagtgaggatgaatttagccaggcctaagaaaaaaggcagcgat
catgcggctcagcatgggattgagttaggcgtgaaaatccctaccatcaacacgaactac
tactcctttatgggggctgaactcaaataccgaaggctctatagcgtgtatttgaattac
gtgttcgcttactag
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