Helicobacter pylori HPAG1: HPAG1_1435
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Entry
HPAG1_1435 CDS
T00365
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03420
Nucleotide excision repair
hpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPAG1_1435
03430 Mismatch repair
HPAG1_1435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_1435
Enzymes [BR:
hpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPAG1_1435
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPAG1_1435
MMR (mismatch excision repair)
Other MMR factors
HPAG1_1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
RNase_H_2
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ABF85502
LinkDB
All DBs
Position
1493023..1495071
Genome browser
AA seq
682 aa
AA seq
DB search
MMDFEKSILGNLNGVQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTL
TLTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSD
EVKTLCKQLKISNFRASISQIKNGMMDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFL
SLKILQDNETIAKETSEHYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYG
FRGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHVKTLQSFKGSH
KSVICKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYR
LIGAVSFYERAEVKDALAFMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDDEGL
NLEEALKLGAFKDKLNPKNEYALKKFMAMIGRLREAFEISVEEFCARFLEETNLLKSYEK
EDNYEEREGFVKELLTLLKEHFKTNPTHSLLDFLNESVLDVHNAENAQKVSCMSVHMSKG
LEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKI
SCSPSVFLEEAQLLQQDKPPKQDHKKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKI
NCGGNVYDKISAKFVEKVDNGF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgaaaaaagcattttaggcaatttaaacggggtgcaaaaaatcgctgca
agccatattcaagggccattgctcattttagcaggagctgggagcggcaagactaagact
ttaacgagccgtttagcgtatttgattggcgtttgtggcgtgcctagcgagaacacttta
acgctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttg
aaaaaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttt
ttaaggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgctagatagcgat
gaagtcaaaacgctgtgcaaacagctcaaaatttcaaactttagagccagtatttctcag
atcaaaaacggcatgatggatttgagcatgcaagatagcgaatgctataaagcgtatgag
ctttatcaaaacgcactcaaaaaagacaatttagtggattttgacgatttgcttttttta
agccttaagattttacaagataatgaaactatcgccaaagagactagcgagcactaccat
tacattatggtagatgagtatcaagacacgaacgccctgcaattggagtttttaaaaaaa
ttgagtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggg
tttagaggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaag
gtggtgaaattagagaccaactaccgctccagcgctgaaattttagcatgcgctaattct
ctcatcagccacaaccaacaccgccatgttaaaacgcttcaaagttttaagggatcgcat
aaaagcgtgatttgtaaagaatatttgacgcaaaaagaagagagcctggatgtggcttat
caaatcaaagcccttttaaagaaaggcgagaatttagaaaatatcgctattttgtatcgc
ttaaacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccttatagg
ctcattggggcggtgagtttctatgaaagagccgaggttaaagacgctttggcgttcatg
catgtagtggctaaaaaagacgatcgcttttttattaagcgcgttttaaacaagccccca
agaggtcttggcaagatcactcaagaatggattttttctcttttagatgatgagggtttg
aatttagaagaagcgctaaaacttggggcgtttaaagacaaactaaaccctaaaaacgaa
tacgctttaaagaaattcatggccatgatagggcgtttgagggaggcttttgaaatttca
gtagaggagttttgcgctcggtttttagaagagactaaccttttaaaaagctatgaaaaa
gaagacaattacgaagaaagagagggctttgttaaagagcttttaaccttattgaaagag
cattttaaaactaaccccacgcattctttgctggattttttgaatgaaagcgtgttagat
gtccataatgcagaaaacgcgcaaaaagtgagctgcatgagcgtgcatatgagtaaggga
ttagagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcataggggg
ttcaatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagg
gctaaagaaggattgcagctctcttatgtgaaagagcgttcgtattttgggaggaaaatt
tcttgctcgccctctgtgtttttagaagaagcccagttgctccaacaagacaaaccccct
aaacaggatcataaaaaagatacgcccattaaagtgggggatttgattaagcataagatt
tttggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgtttgaaaatc
aattgcggagggaatgtctatgataaaatctcagcaaaatttgtagaaaaagtggataac
gggttttga
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