Helicobacter pylori HPAG1: HPAG1_1455
Help
Entry
HPAG1_1455 CDS
T00365
Name
(GenBank) DNA polymerase III alpha-subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03030
DNA replication
hpa03430
Mismatch repair
hpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPAG1_1455
03430 Mismatch repair
HPAG1_1455
03440 Homologous recombination
HPAG1_1455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpa03032
]
HPAG1_1455
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_1455
Enzymes [BR:
hpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPAG1_1455
DNA replication proteins [BR:
hpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPAG1_1455
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPAG1_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABF85522
LinkDB
All DBs
Position
1512217..1515852
Genome browser
AA seq
1211 aa
AA seq
DB search
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSVTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMFLSSMAYLEGFYYFPR
INKKLLKEHSKGIIASSACLQGEVNYHLNTNNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAKNEGLNFEDDASYFAHKAREGLKERLILVPKEKHDQYKERLEKEIEVITNMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKISVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPIAYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKGELEKKIVFGLGAVKGVGGEPIKNIIEERVKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGGNSLFG
AMECGTKEQVILDMIDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLSALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPDRQKEEVREIPPIEMLA
SSSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKGLEWRDLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaataaagccttcacgcatttgcacttgcacacagaatattcgcttttagac
ggagcgaacaagattaaaattctagccaaacgcattaaagaattgggcatgaaaagcgtg
agcgtaactgatcatgggaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcattaagcctattatcggcatggaagcgtatatccataatgatgacaacctttct
agcaaagaaaccaagcaacgcttccatttgtgcctgttcgctaaaaaccaagagggctat
gaaaatttgatgtttttaagctctatggcgtatttagaagggttttattatttcccgcgc
atcaataaaaagcttctaaaagagcattctaaaggcattatcgcttctagcgcgtgcttg
caaggggaagtcaattaccatttgaataccaataatgagagaaaccgcaagtatggggct
aaaggctatgatgaagctaaaaaaatcgcttgcgaataccaagagatttttgaagacgac
ttttatttagaaatcatgcgccatggcattttagatcagcgattcattgatgagcaagtc
attaaaatgtctttggaaacagggttaaaaatcattgccaccaacgacacccactacacc
atgcctaatgacgccaaagctcaagaagtagcgatgtgcgtagcgatgggtaaaacccta
aacgataaggggcgtttgaaacactccgtacatgagttttacattaaatcccctgaagaa
atggcaaagctctttgcagatattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccctccaacccccccaagc
ttcaaattcactaaagcttacgccaaaaatgaggggttgaattttgaagatgacgcttct
tattttgcccataaggctagagaaggcttgaaagaacgcttaatcttagtgccaaaagaa
aagcatgatcaatacaaagaacgcctagaaaaagaaattgaagtcatcacgaacatgaaa
ttcccggggtatatgctgatcgtgtgggattttatccgttacgctaaagaaatgggtatt
cctgtggggcctggtagggggagtgcggccgggagtttggtggcttttgccttaaaaatc
acggatattgaccctttgaaatacgatttgctctttgaaaggtttttaaaccctgaaaga
gtcagcatgcctgatattgatacggatttttgccagcgccggcgtaaggaaatcatagaa
tacatgattgaaaaatacggcaaatacaatgtggctcaggtcatcacctttaataagatg
ttggctaaaggcgtgatcagagatgtcgcaagggttttggacatgccctataaagaagcc
gatgattttgccaaactcatacccaaccgcttaggcatcacgcttaagggctatgaaaaa
aatggcgagttcatagagggggcgtgggaattagagcctaaaatcaaggaattagtagag
agtaatgaattagccaaacaagtgtgggagtattcgctcaatttagagaatttgaatcgc
aacgcaggcgtgcatgctgcagccttagtggtggatagccaaaaagagttgtggcacaaa
acccctttatttgcctctgaaaaaaccggcggtatcgttacgcagtattccatgaagtat
ttagagccggtggatttgatcaagtttgactttttggggcttaaaaccttgaccgtgatt
gatgatgcgcttaaaatcattaaaacgcagcacaaaattagcgtggattttttatcgttg
gatatggacgatccgaaagtgtataaaacgatccaaagcggggatacggtggggatcttc
cagattgaatccgggatgtttcaggggcttaacaagcgcttaaggccctcaagctttgaa
gacattatcgccattatcgcactagggagaccgggacctatggaatcaggcatggtagat
gattttgtcaatagaaagcatggcattgagcctatcgcttatgcgtttaaagaattagag
ccgattttaaagcccacttacggcacgatcgtctatcaagagcaggtgatgcaaatcgtg
caaactattggcggtttcagtttgggtgaagcggatctcatccgccgcgctatggggaaa
aaagacgctcagatcatggcggacaataaggctaagtttgtagaaggcgctaaaaattta
gggcatgatggccaaaaagcggctaatttgtgggatttgatcgttaaatttgctggttat
ggtttcaacaaatcgcattcagccgcttatgcgatgatcactttccaaacggcgtattta
aagacttattacaagcatgagttcatggcagcgatgctcactagcgaatccaataagatc
gaatccgtggcgcgctatattgatgaagtcagggctttagaaattgaagtgatgccccca
cacatcaattcttctatgcaagatttcagcgtggcggagtttaaaaaccaaaagggcgaa
ttggaaaagaaaatcgtgtttggtttaggagcggttaaaggggttgggggtgagccgatt
aaaaacatcattgaagaaagggttaaaggagattataagagtttagaagattttatttca
cgagtggatttttctaaactcactaaaaaatctttagagccattagtgaaatcagggagc
ttggacaatttaggctacacccgaaaaaccatgctcgctaacttggatttaatctgtgat
gctgggcgcgctaaagacaaggctaatgaaatgatgcaagggggtaactccctttttggg
gcaatggaatgcgggaccaaagagcaggttattttggacatgattgatttgggcgaacat
gacgctaaaacgcttttagaatgcgaatacgagactttaggcatccatgtttcaggcaat
cccttagacgagtttaaagaagaaattaagggctttaaaaatttagtcaaaagcattgat
attgaagagttagaaatcggttcgcaagcttatttgctgggtaaaatcatggaagttaaa
aagaaaattggcaaacgaagcggtaagccttatggcacagcggacattttggacagatac
ggcaaatttgaactcatgctgtttgaaaagcaattgagcgctttagaagagttggatatt
aataagcctctagtgtttaaatgcaagattgaagagcaagaagaggtggcgcgattaagg
ctttttgaaatcttggatctagagagcgctagggaggttaaaatccctaaagcccgctat
aaagaccctgacaggcaaaaagaagaggtgcgcgaaatcccccccattgaaatgctcgcc
tccagctcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaaga
caaatcaaagagagcgctttaaaacaccagggcaaacgccccttgtatttgatcatcaaa
gataaggataagcaattcaaaatccaaagcgatttaatggtaaatgaaaagattaaggac
gattttaaagggttagagtggagggatttagcttga
DBGET
integrated database retrieval system
