Helicobacter pylori HPAG1: HPAG1_1481
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Entry
HPAG1_1481 CDS
T00365
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03030
DNA replication
hpa03430
Mismatch repair
hpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPAG1_1481
03430 Mismatch repair
HPAG1_1481
03440 Homologous recombination
HPAG1_1481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpa03032
]
HPAG1_1481
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_1481
Enzymes [BR:
hpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPAG1_1481
DNA replication proteins [BR:
hpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPAG1_1481
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPAG1_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABF85548
LinkDB
All DBs
Position
complement(1542646..1543617)
Genome browser
AA seq
323 aa
AA seq
DB search
MIKISLNSNKRAWMWWFQGVIFLNLKIVSWLLKAYRMSDSLLHKDIQALIARLKHQDLSL
GMLEKSLSRLIYDEINLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFIDLETTGSC
PLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYIAELTGITYEDTLNAPSAHEALQEL
RLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKE
LLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRARHQ
ETPPPFSLFERTKGLFNIIKATS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatatctttgaactccaacaagcgggcgtggatgtggtggtttcagggagtt
atatttttaaatctaaagatcgtaagctggctattgaaggcttacagaatgtcagacagc
ctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccaggatttaagcttg
ggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaatttggaatattta
aaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacgctcaaaaacctt
aaaaccccccttaaagatgaggttttttcctttattgatttagagaccaccggctcttgc
cccctaaaacatgagattttagaaattggggccgtgcaagtgaaagggggggaaattatt
aatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatcgctgaacttaca
ggcatcacttatgaagacaccctaaacgccccaagtgcgcatgaagctttgcaagaattg
cggctttttttaggcaatagcgtgtttgtagcccataacgctaattttgattacaacttt
ttagggcgttattttgtagaaaaattgcattgccccttattgaatttaaagctttgcact
ttggatttatccaaacgagccattttatccatgcgttattctttgagctttttaaaagag
cttttagggtttggcatagaagtcagccacagagcctatgcggacgctttagcgagctat
aagctctttgaaatatgcttattaaacttgcccagttacatcaaaacgacaatggatttg
attgatttttccaaatgtgctaacaccttgatcaaaagacccccaagagccagacaccaa
gagactccaccgccgttttctctttttgagaggacaaagggtttgttcaatatcataaaa
gcaaccagttaa
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