Haemophilus parahaemolyticus: E5Q53_00880
Help
Entry
E5Q53_00880 CDS
T06595
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpaa
Haemophilus parahaemolyticus
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpaa03032
]
E5Q53_00880 (topA)
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_00880 (topA)
Enzymes [BR:
hpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E5Q53_00880 (topA)
DNA replication proteins [BR:
hpaa03032
]
Prokaryotic type
DNA Topoisomerases
E5Q53_00880 (topA)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5Q53_00880 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_bTOP1
Zn_Ribbon_Topo
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF7351
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QEN10126
UniProt:
A0AAE6MN76
LinkDB
All DBs
Position
complement(172341..174941)
Genome browser
AA seq
866 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPKSGSEEKTERAKPISTKGMSAE
EKAKVKAEKERNALVKRMGIDPYHGWKANYQIMPDKLKVVSELKTLAKKADHIYLATDLD
REGEAIAWHLREVIGGDDSRFSRVVFNEITKNAIKKAFEKPEHLNIDRVNAQQTRRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEFWEIVADTQSNGRKL
PLDLTNYLGKKWQAKNEAEAMQAVKNLQQSAFIVTDIEKKPTSSKASPPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMARSYIDKQFGSQYLPEKPNF
YSSRENAQEAHEAIRPSDINVTMADLSGMEKDAERLYDLIWRRFLACQMLPAQYDSTSLT
VGAGDYELKAKGRVLRFDGWTKVLPVQGKTAEDQELPNVALNEELALQAVNPSQHFTKPP
ARYSEAALVRELEKRGIGRPSTYASIISTIQERGYVHVENRRFYAEKMGEIVTDRLNESF
GDLMNYDFTANMEETLDQIAEGNKNWIDALNAFFKDFSEQLTQAELDELQGGMKPNSIVP
TNIDCPTCGRKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEEELINVLDEDSETKA
LMARKRCPKCDSAMDSYIIDPHRKLHVCGNNPNCDGYLVEEGTFKIKGYDGPIVECDKCG
ADMHLKLGRFGKYMGCTNCDNTRKILKNGEVAPPREEPIPFPELRCEKADAYFVLRDSAV
GVFMSAHNFPKVRESRPAKVSELAQYRDRLPEKLQYLADAPLTDPDGNPAIISFSRKEKR
QYVTSEKNGKKTKWIMDYVDGKWVMR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcattagttattgttgagtcaccagccaaagcgaaaacaatcaataaatac
ttaggcagtgactatgtagtgaaatcaagcgtagggcatattcgagatttgccaaaaagt
ggctcagaagagaaaacagaacgagcgaaaccaatttccactaaaggaatgagtgccgaa
gaaaaagcaaaagtgaaagcggaaaaagagcgtaatgcgttggtaaaacgtatggggatc
gacccttatcacggttggaaagcaaattaccaaattatgcctgataaactgaaagtggtt
tcagagcttaaaacgttagcgaaaaaagccgaccatatctatcttgccaccgacttggat
agagaaggggaagcgattgcctggcatttacgtgaagtgattggcggcgatgatagccgc
tttagtcgtgtggtgtttaacgaaattaccaaaaatgcgattaaaaaagcgtttgaaaag
ccagaacatctgaatatcgaccgtgtaaacgcacagcaaactcgtcgctttttagaccgt
gtggtgggctttatggtgtcgccattgctatggaaaaaagtggcacgtggtttatcggct
ggtcgtgtgcaatcggttgctgtgaaattattggttgaacgtgagcgtgaaatcaaagct
ttccagcccgaagaattctgggaaattgtggcggatacgcaatcaaatggcagaaaacta
ccgcttgatctgacaaattatctcggcaaaaaatggcaagcaaagaacgaagcagaagca
atgcaagcggtgaaaaacttgcaacaatctgcgtttatcgttaccgacattgagaaaaag
ccgaccagctcaaaagcaagtccgccattcatcacttcaacgcttcaacaaacggcaagc
acccgtttgggctttggcgtgaagaaaacgatgatgttggctcaacgcttatatgaagcg
ggctatattacctatatgcgtactgactcaactaacttgagccaagatgcgttgaatatg
gctcgtagttatatcgataaacaattcggctcgcaatatttacccgaaaaaccaaatttc
tactctagccgtgagaatgctcaagaggctcacgaagcaattcgcccatcagatataaat
gtcacaatggcggatttatcgggtatggagaaagatgctgaacgtttatacgacttgatt
tggcgtcgtttcttagcctgccaaatgcttccagcacaatatgattcaactagtttaact
gttggtgctggcgattatgaattaaaagcgaaaggtcgcgtcttacgttttgatggttgg
acgaaagtgttacctgtgcaaggtaaaacggcggaagaccaggagttaccaaatgttgct
ttaaatgaagaattagcgttacaagcggttaatcctagccaacattttaccaaaccgcct
gcacgctactcggaagcggcattagtgcgtgagttggaaaaacgtggtattggtcgccct
tcaacttatgcctcgattatttcgaccattcaagagcgtggttatgtacacgtggaaaat
cgccgtttctacgcagaaaaaatgggtgaaattgtgactgatcgccttaatgaatctttc
ggtgatttaatgaactatgatttcactgcgaatatggaagaaacgctcgaccaaatcgca
gaaggcaataaaaactggattgatgcgttaaatgccttctttaaagatttttccgagcaa
ttaacccaagccgaattggacgaattacaaggcggaatgaagccgaacagcattgtgcca
accaatattgattgtccaacttgtggacgcaaaatggcaattcgcaccgcctcaacagga
gtatttttgggttgtacaggttatgcattaccaccgaaagagcgttgcaaaaccacaatg
aatttaattcctgaagaggagttgattaacgtattagatgaagattcagaaactaaggcg
ttaatggcacgtaaacgttgtccgaaatgcgattcggcgatggatagctacattatcgat
cctcatcgtaaattacacgtttgtggtaacaatccaaattgcgatgggtatttggttgaa
gaaggcacattcaaaattaaaggctatgatggccctatcgtggaatgtgataaatgtggt
gcggatatgcacttaaaactggggcgtttcggtaaatatatgggctgtacgaactgcgat
aacacccgcaaaattctgaaaaacggtgaagttgcgccgccgcgtgaagagccaatccca
ttcccagaattaagatgtgaaaaagcagatgcctattttgtattgcgtgatagtgcggtt
ggggtgtttatgtcggcacataacttcccgaaagtgcgtgaaagccgccctgcaaaagtg
agcgaattagctcaatatcgcgaccgcttgccagaaaaattgcaatatttagcagatgca
ccattaacagacccagatggtaatcctgcgattattagtttcagccgtaaagagaaacgt
caatatgtgacctctgaaaagaacggcaagaaaaccaaatggattatggattatgttgat
gggaagtgggtaatgcgttaa
DBGET
integrated database retrieval system
