Haemophilus parahaemolyticus: E5Q53_01580
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Entry
E5Q53_01580 CDS
T06595
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03030
DNA replication
hpaa03410
Base excision repair
hpaa03420
Nucleotide excision repair
hpaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5Q53_01580 (polA)
03410 Base excision repair
E5Q53_01580 (polA)
03420 Nucleotide excision repair
E5Q53_01580 (polA)
03440 Homologous recombination
E5Q53_01580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpaa03032
]
E5Q53_01580 (polA)
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_01580 (polA)
Enzymes [BR:
hpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5Q53_01580 (polA)
DNA replication proteins [BR:
hpaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E5Q53_01580 (polA)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E5Q53_01580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5Q53_01580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WH_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
QEN10252
UniProt:
A0AAE6JQ03
LinkDB
All DBs
Position
complement(325761..328613)
Genome browser
AA seq
950 aa
AA seq
DB search
MATIAQNPLVLVDGSSYLYRAFHAFPPLTNREGEPTGAMYGVVNMLKSLISQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLISVEGVEADDVIGT
LAVQAAKEGKHVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELVIDWL
ALQGDSSDNIPGVKGVGEKTALALLQGIGSIKTIYENLDKVAELSFRGAKTFAPKLLAEK
EMADLSYLLATIKTDVELDVTHDQLTTSPQDRDKLVELFGKYEFKKWLNEVMNGTNPVTT
STKERIPTNYEVTQAVEKTESFAKVEIDRSKYETVTIETQLTKWIKKIQKEKLVAVDTET
NALDVMSAELVGISFGLASGEACYIPLTHKEEVSEQAGQGDLFVESTATLGYELVKNQLD
LTACLAQLKPILEDEQIKKIGQNIKYDLTVFANHGIEVQGVAFDTMLESYTQNSTGRHNM
DDLAERYLGHKTIAFEEIAGKGKNQLTFDKIALDVASEYAAEDADVTMKLHQTLFPELEK
TPTLLKLFNDIEMPLVRVLSHIERNGVLIDPQKLLAQSQEIEQRLAEVEAEVHQAAGQEF
NLASTKQLQEILFEKLGLPVKKKTPKGAPSTNEEVLEELAQEGHIVPKLLIEHRGLSKLK
STYTDKLPQMINPKTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIARE
GYKIVAADYSQIELRIMAHLAHDEGMLKAFTEGKDIHRSTAAEIFGVSLEEVTNEQRRNA
KAINFGLIYGMSEFGLSNQLGISRQEARSYMDAYFNRYPNVLQFMTDIKTKAAEQGYVET
LLGRRLYLPEIKSSNAMRRKAAERVAINAPMQGTAADIIKVAMIGIDKAILGDENIKMIM
QVHDELVFEVKAEMVEHYSQLIKTEMEKAIKLHIPLIADVGVGDNWDEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcgactattgcacaaaatccactggtgttagtggatggttcttcttatttgtatcgt
gcgtttcacgcatttccaccgttgactaaccgagagggcgagcctacgggggcgatgtat
ggtgtggtaaatatgttgaaaagtttgatttcacaagttgagcctagccatattgcggtg
gtatttgatgctaagggtaagacttttcgtgatgagctgtttgaacaatataaatcgcat
cgtccgccgatgccagatgagctacgttcccaaatccaaccgctacatgccattattaag
gcattggggattccgctgatttcggttgaaggtgtggaagccgatgatgtgatcggtacg
cttgcagtgcaagctgcaaaagaaggtaagcacgttctaatcagcaccggcgataaagat
atggcacaattagtgaacgatcatattatgctgattaacacgatgaataacaccttactt
gaccgagaaggcgtaattgagaaatatggcattccacctgaattagtgattgattggctt
gcgttacaaggcgattcgtcggataacattcctggtgtaaaaggtgtgggcgagaaaacc
gcacttgccttgttgcaaggtattggctcaattaaaaccatctatgaaaatttagataaa
gtggcggaattaagtttccgcggggcaaaaacgtttgctccgaaattgttagctgaaaaa
gagatggcggatctttcttatttattggcaacgatcaaaactgatgttgagttggacgtt
actcacgatcaactcactacttcaccgcaagatcgcgataaattggtggagcttttcggt
aaatatgagtttaaaaaatggctcaatgaggtgatgaacggcacaaatcctgtgacgact
agcaccaaagaacgtattccaaccaattatgaagtcacgcaagcggtggaaaaaacagaa
agttttgcgaaagtagagatcgatcgttcaaaatatgaaacggtaacgatagaaacacaa
cttacaaaatggataaagaaaatccaaaaagaaaaattggttgcagtcgataccgaaacg
aatgcgttggatgtgatgtcggcagagcttgtagggatttcatttggactagcttctggt
gaagcgtgctatattccattgactcacaaagaagaagtgagcgaacaagctgggcagggc
gatttgtttgtagaaagcactgcaaccttgggctatgaattagtaaaaaatcagcttgat
ttaaccgcttgtttagcacaattaaagccgattttggaagacgagcagatcaaaaaaatt
gggcagaacatcaaatatgatttaacggtatttgctaatcacggcattgaagtgcaaggt
gtggcgtttgatacaatgctggaatcttacacccaaaatagcacagggcgtcataatatg
gacgacttggcagaacgttatttagggcataaaaccattgcatttgaagagattgcgggc
aagggtaaaaatcagttgaccttcgataaaattgcgttagatgttgcctctgaatatgcg
gcagaagatgcagatgtaacgatgaaattgcatcaaaccttgttcccagagcttgaaaaa
acgccgactttgttgaaactgtttaacgatattgaaatgccgctagtgcgtgtgctttcg
catattgaacgcaatggtgtattgattgatccgcaaaagctgttggcacaatcccaagag
attgaacagcgtttggcggaagtggaggcagaagtgcatcaagctgcggggcaggagttt
aacctggcttctacgaaacagctacaagaaattttgtttgaaaaactcggtttgcctgtg
aagaaaaaaacgcctaaaggtgctccttcaactaacgaggaagtgttggaggaattggct
caagaagggcatatcgtgccaaaattgttgatagaacatcgtggattaagcaagttgaaa
tcgacttatactgataaattaccgcagatgattaacccaaaaacaggacgagtacatacc
tcttatcatcaggcagtaaccgcaacagggcgactttcttcgagtgatccgaatttgcag
aatattccaattcgaaacgaagagggcagacgtattcgccaagcctttattgctcgtgaa
ggctacaaaattgtggcagcggactactcgcaaattgaacttcgcattatggcacatctt
gcccacgatgaaggtatgctaaaagcctttacagagggtaaggatattcaccgatcaaca
gccgcggagattttcggtgtgtctcttgaagaagtgactaacgaacaacgtcgcaatgcg
aaagcgattaacttcggcttgatttatggcatgtcggaatttggtttatcgaaccagctc
ggcatttctcgccaagaggcaagaagttatatggatgcttatttcaaccgctatccgaat
gtgttgcaatttatgacagatattaaaaccaaagctgcagagcaaggttatgtagaaact
ctgttaggaagacgattatatttgcctgaaattaaatcaagcaatgcaatgcgtcgcaaa
gcggcagaacgtgtggcaatcaacgcaccaatgcaaggaacggcagcagatattatcaaa
gttgcgatgattggtattgataaagcaattctgggggatgaaaacatcaaaatgattatg
caagtacacgatgagttggtatttgaagtgaaagcggaaatggtcgaacattacagccag
ttgattaagacggaaatggaaaaagcgataaaattgcacataccattgattgcagatgtt
ggtgtgggcgataattgggatgaagcacactag
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