Haemophilus parahaemolyticus: E5Q53_03405
Help
Entry
E5Q53_03405 CDS
T06595
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5Q53_03405 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpaa03019
]
E5Q53_03405 (pcnB)
Enzymes [BR:
hpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
E5Q53_03405 (pcnB)
Messenger RNA biogenesis [BR:
hpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E5Q53_03405 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEN10580
UniProt:
A0AAE6JQB2
LinkDB
All DBs
Position
complement(737135..738568)
Genome browser
AA seq
477 aa
AA seq
DB search
MRPAVELKRTERATSKGKKAQDGVPSHILHKKHTIHAGQYCISPKDFPKNALAIVEKLHR
AGYEAYIVGGCVRDLLLGKKPKDFDISTNARPEEVQKIFGRQCRLVGRRFRLAHIMYGRE
IFEVATFRAGHENHTNDKISKVSDEGMLLRDNVYGTLFEDAGRRDFSVNAFYYDPRHNLI
YDFFNGIEELRAGKLRLLGEPTQRYQEDPVRMLRAIRFMAKLDMFLDKETEAPIKTLAPL
LSKIPAARLFDESLKLLQSGTGFKTYELLREYHLFEQLFPVLTPFFTEHQDSNAERMIKR
ALMSTDDRIRDKLPVNPAFLFAALFWYPLREKIDELKNEGGLNTHDSMMLAANEILDESC
KAVALHRRHTGIIREIWALQFQMTKRTAKRALQTLEVQKFRAGFDLLVMRAETEGGDLVE
LSAWWHEFQFSNDKQRDEMLQAVKKLPNFANEEAKKKRRRKTFRRKKPANKKAEVNA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctgccgttgagctaaaacgaacagaacgagcgacatccaaaggtaaaaaagcc
caagatggcgtaccctcccatattttgcataaaaaacataccattcacgcagggcaatat
tgcattagcccgaaagatttcccgaaaaatgcattagccattgttgaaaaattacatcgt
gcaggctatgaagcctacatcgtaggcggttgcgttcgcgatttattgcttggtaaaaaa
ccaaaagatttcgatatttcaaccaatgctcgccctgaagaggtacagaaaatttttggg
cgtcaatgtcgcttagtgggacgccgtttccgcttagcacatattatgtatggtcgcgaa
atttttgaagttgccactttccgtgcggggcacgaaaatcacactaacgataaaatctct
aaagtcagtgatgaaggaatgctgttgcgagataatgtttacggcacgttatttgaagat
gcagggcgtcgagatttctccgtcaatgcgttttactacgatcctcgccacaatttaatt
tacgatttcttcaacgggattgaagagctgcgtgcgggcaaattgcgtttactgggcgag
ccaactcaacgctaccaagaagatcctgtgcgaatgttgcgtgcaattcgctttatggcg
aaattggatatgtttttggacaaagaaaccgaagcaccaatcaaaacccttgcaccgttg
ttaagcaaaattcctgccgcacgtctctttgatgagtcgttaaaactcttgcaatcgggc
acgggcttcaaaacctatgaattgttgcgtgaatatcacctgtttgagcagctgttccct
gtactcacaccgtttttcactgagcatcaagactcaaatgcggagcgaatgatcaagcga
gccttgatgtctaccgatgatcgtattcgcgataaattaccagtgaaccctgcgttttta
tttgcagccttattctggtatccgctacgtgaaaaaattgatgagttgaagaacgaaggc
ggtttgaatacgcacgattcaatgatgcttgcggcaaatgaaattttagacgaaagctgc
aaagccgtggcattgcatcgccgtcatacgggcattatccgcgagatttgggcgttacaa
ttccaaatgactaaacgcacagccaagcgtgccctacaaaccttggaagtacaaaaattc
cgtgcgggttttgatttactcgtgatgcgtgccgaaaccgaaggtggcgatctagttgag
ctttctgcttggtggcacgagttccaattcagtaacgataaacaacgtgatgaaatgttg
caagcagtgaaaaaactaccgaattttgcgaacgaagaggctaagaaaaaacgtcgtcgc
aaaacatttcgtcgtaaaaaacctgcgaataaaaaagcggaggtaaatgcttaa
DBGET
integrated database retrieval system
