Haemophilus parahaemolyticus: E5Q53_05065
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Entry
E5Q53_05065 CDS
T06595
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5Q53_05065 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpaa03021
]
E5Q53_05065 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_05065 (rpoA)
Enzymes [BR:
hpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5Q53_05065 (rpoA)
Transcription machinery [BR:
hpaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E5Q53_05065 (rpoA)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E5Q53_05065 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
GAPS4b_N
Motif
Other DBs
NCBI-ProteinID:
QEN10860
UniProt:
A0AAE6MP41
LinkDB
All DBs
Position
complement(1084173..1085162)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQISLTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIVLTLTKSGIGPVTAGDITHDGD
VEIVNSNHVICHLTDKNASINMRIRVQRGRGYVPASARVHTQDDDRPIGRLLVDARFSPI
DRIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKTETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagaatttttaaagccgcacttagtgaatattgaacaaattagt
ttaactcacgcaaaagtgaccctagagccgttagaacgtggttttggccatacattaggt
aacgcactccgtcgcattttactttcgtcaatgccaggttgtgccgtcactgaagttgaa
attgatggtgtattacatgaatacagcagcaaagaaggcgtacaagaagatattcttgaa
gtattgttaaaccttaaaggtctagcggtaaaagtgcaaaacaaagatgacattgttttg
acactgactaaatctggaattggccctgtgactgcaggcgacattacacacgatggtgat
gttgaaattgtaaattctaaccatgttatctgtcatttgacagataaaaatgcatctatt
aatatgcgtattcgcgtacaacgtggtcgtggttatgtaccagcatcagctcgtgtacac
actcaagacgatgatcgtcctatcggtcgtttacttgtagatgcacgttttagcccaatt
gatcgcattgcttacaatgtagaagcggcacgtgttgaacaacgtacagacttggataaa
ctcgttattgagatggaaacaaatggcactatcgatccagaagaagccattcgtcgtgct
gcaacgattttagctgagcagttagacgcatttgttgatttacgtgatgttcgtcaacca
gaagtgaaagaagaaaaaccagagtttgatccgattttactccgtccagttgatgatctt
gaattaacagttcgttctgctaactgtttgaaaacagagacaattcactatatcggtgat
ttagtacaacgtacagaagttgagttattaaaaacccctaatcttggtaagaaatctctt
acagagattaaagatgttctcgcttctcgtggcttgtcactgggtatgcgccttgaaaat
tggccgccagcaagcattgctgaagactaa
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