Haemophilus parahaemolyticus: E5Q53_07790
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Entry
E5Q53_07790 CDS
T06595
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03420
Nucleotide excision repair
hpaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5Q53_07790 (uvrD)
03430 Mismatch repair
E5Q53_07790 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_07790 (uvrD)
Enzymes [BR:
hpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5Q53_07790 (uvrD)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5Q53_07790 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E5Q53_07790 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF7432
PhoH
Motif
Other DBs
NCBI-ProteinID:
QEN11331
UniProt:
A0AAE6JSG6
LinkDB
All DBs
Position
complement(1605701..1607890)
Genome browser
AA seq
729 aa
AA seq
DB search
MDFSLLLDGLNDKQRESVAAPIGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAASEMRHRIESTLFQTSNHSMFGMWVGTFHSIANRLLRSHYLDADLPQDFQIMDS
EDQVRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGNRAKDIEHHNDLNEKKLVEIYQL
YQEACDRAGLLDFAELLIRTYEMLKKKPLILQRYQQRFQHILIDEFQDTNNIQYDLIRLL
AGNSGKVMIVGDDDQSIYGWRGAQVENIQRFLKDYPNAETIRLEQNYRSTGHILSAANEL
IANNDNRLGKNLWTASGNGDPVEIYCAFNELDEARFVASQIQQWKEDEGSYSECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPPR
GIGDRTLDTIRQITRTRSITLWQAVQVTLNEEQLSGRSASALLRFVELINAMDEETSEMA
LAEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFTPPEEAEELTPLTAFLT
HASLEAGEAQASPHQEYVELMTLHSAKGLEFPRVFMVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKRKLTISYAELRRLYGKEERHIPSRFIAELPEENIREIRLRGNINRAANFG
TVAKHPPKTTASILEDDVWKMGQKVYHAKFGQGTIINVEGSGEATRLQIAFQGNGIKWLI
AKMAKLEKL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattacttgatggcttgaatgataaacaacgcgaatcagtcgctgcc
cctattggcaattatttggtgttagctggggctggttcaggtaaaactcgtgtactcact
caccgtattgcgtggttaattggtgtagaaaatgtgcctgaatcaaacattttagcagta
acttttaccaacaaagcggctagcgagatgcgtcatcgtatcgaaagtacgctttttcaa
acaagcaatcattccatgtttggtatgtgggtaggaaccttccacagtattgccaaccgt
ctgttacgttctcactatttagatgctgatctgccacaagattttcagattatggacagc
gaagaccaagtccgattacttaaacgtttgctgaaattacacaatattgatgaaaaacat
tttccaccaaaacacgtagcttggtatatcaatgcccaaaaagataagggtaatcgagct
aaagatattgaacatcacaatgatctgaatgagaaaaaattagttgaaatttaccagctt
taccaagaagcgtgcgaccgtgcaggcttattggattttgcggaattactgattcgcacc
tacgaaatgttgaagaaaaaaccgctaattttgcaacgctatcaacaacgcttccagcat
attttgatcgatgagttccaagacaccaacaatattcaatatgatctgatccgactgctt
gcgggtaattcgggcaaggtaatgattgtgggcgatgatgaccaatcgatctacggctgg
cgtggggctcaggtggaaaatatccaacgtttcttaaaagattacccaaatgcggaaacc
attcgactagagcaaaattaccgctcaacagggcatattctctcggcggcaaatgagctg
attgccaacaatgataaccgtttgggtaaaaatctctggacagcaagtggcaatggcgat
cctgttgaaatttattgtgcctttaatgaactagacgaagcccgttttgttgcctcacaa
attcagcaatggaaagaggatgagggcagctattcagaatgtgccgtgctttatcgcagc
aacagccaatcacgcgtgattgaagaagccttaattcaagccaatattccgtaccgcatt
tatggcggtatgcgattcttcgaacgccaagagattaaagatgcattggcttatctgcgt
ttaattgctaatcgccaagatgatgctgcatttgaacgcgtggtcaataccccaccgcga
ggtataggtgatcgcaccttggacactatccgccaaattactcgcacacgttccatcact
ctttggcaagcggtgcaagtaacgttaaatgaagagcaactttctggtcgctccgcgtcc
gctctgcttcgctttgtggaactgattaacgccatggatgaagaaacttcagaaatggca
cttgcagaacaaaccgattttgtgattaaaaaatctggtctgtatgagatgtacaagcaa
gaaaaaggcgagaaaggcgaagttcgcatcgaaaacttagaagagttggtcactgcaacc
aagcaatttactccgccagaagaggctgaagaactcacaccattaaccgcttttctaacc
catgcatcattagaagcaggcgaagcacaagcctcgccacatcaagagtatgtggagctg
atgacacttcactcagcaaaaggattggaattcccccgcgtatttatggtgggcgtggaa
gaaggaattttccctagcggaatgagctttgacgaaggacgattgcaagaagaacgtcgc
ttggcatatgtaggtattacccgagcaaaacgcaagctaaccattagttatgctgaactt
cgtcgcctttacggtaaggaagaacgccatattccatcgcgttttattgctgaattgcca
gaagaaaatatccgagaaattcgcttacgtggcaatattaaccgtgcggcaaatttcggc
accgttgcaaaacatccgccaaaaacgaccgcttccattttagaagatgatgtttggaaa
atggggcagaaggtctatcacgctaaattcgggcaaggtacgattatcaatgtcgaaggc
tcaggcgaagctacccgcctgcaaattgcgttccaaggtaatggcattaagtggctgatt
gcgaaaatggcaaagctggagaagctctaa
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