Haemophilus parahaemolyticus: E5Q53_08470
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Entry
E5Q53_08470 CDS
T06595
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03030
DNA replication
hpaa03430
Mismatch repair
hpaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5Q53_08470 (dnaE)
03430 Mismatch repair
E5Q53_08470 (dnaE)
03440 Homologous recombination
E5Q53_08470 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpaa03032
]
E5Q53_08470 (dnaE)
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_08470 (dnaE)
Enzymes [BR:
hpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5Q53_08470 (dnaE)
DNA replication proteins [BR:
hpaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E5Q53_08470 (dnaE)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E5Q53_08470 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEN11452
UniProt:
A0AAE6JS97
LinkDB
All DBs
Position
complement(1753021..1756494)
Genome browser
AA seq
1157 aa
AA seq
DB search
MLPRFVHLKVHSDFSMINGLAKVKPLVKNAVADNMVAMALTDFSNFCGLVKFYGEALSSG
LKPIIGADILVRAIPETEELDELTLLAKNNKGYHNITMLLSKAYQQGYVDLPIVEKEWLT
EYNEGIIVLSGGRLGDVGKALLKENAKEAENLTAFYQQYFPEHFYLSLCRTGRTDEENYI
KAAVPFASQHNIPLVAVNDVVFLKPDDFDAHEIRVAIHDSYTLDDPKRPKKYSAQQYFRT
EEEMCRLFADIPSALANTVEIAKRCSVTIRLGEYFLPNFPTGELSTEDYLVQKSREGLEE
RLEFLFPDEEERKNKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKENGIPVGPGR
GSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDHVADTY
GRQAVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRISKLIPLDPGMTLEKAFAAEPKLP
ELYDSDEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGMHPVTHFD
KNDVEYAGLVKFDFLGLRTLTIIKWALEMINARMLSEGKEPVRIESIPLDDKKSFDLLLQ
SKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVS
YPDAQYQHECLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMAA
QREIFEKGAINKGIDGNLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHFPAEF
MAAVMSSEMDNTDKIVGLYDECMNMGLTVVPPDINSGKHRFSVNEKGEIVYGLGAIKGVG
EGPIDTILSARQQDGIFKDLFDLTARVDLKKINRRTFDALIMSGSLDKLGPHRAALMKNL
EDALKASDQHSKMEALGQSDMFGVLTETPEEVQNAYANTPKWSEQTILEGERATLGLYLS
GHPIGRFLKELAHYAPVRLNELQPTFRGQNATVAGMVVGYRVAVTKRGSRIGIATIEDRS
GRLDITLFSEALETYGDLIEKDGIIIATGSIQFDDFSGGLKMSAREIMTLDDARTRNAKS
LALAINQEQLDAKFVKELTACIAPYKEGTLPLHFYYQNEQGRALLKGGLEWRVTPSEKML
VGLRALLGESSVELEFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgctccctcgtttcgttcacctcaaagttcacagtgatttctcaatgattaacggttta
gctaaagtcaaaccgctagtaaaaaatgctgtggcagacaatatggttgcgatggctctt
accgatttcagcaacttttgtggcttggtaaaattctatggtgaagccctcagttcgggg
ttaaaaccgatcatcggggcagatattctcgtacgtgccataccagaaactgaagagctg
gacgagctcactttacttgccaaaaacaacaaaggctatcacaacatcacgatgctcctt
tctaaagcctaccagcagggctatgtcgacctgcccatagtggaaaaagagtggctgacc
gaatacaacgaaggcattatcgtgctttctggcgggcgtttgggcgatgtaggcaaagct
ttactcaaagaaaatgcaaaagaagcggaaaatctgaccgctttctatcaacaatatttc
cccgaacatttctatttgtcgctctgtcgcacagggcgaacggatgaagagaattacatt
aaagcggctgtgccctttgcctctcagcataacattccactcgttgcggtcaatgatgta
gtgttcttaaaacctgacgattttgatgcacacgaaatccgcgtggctattcacgatagc
tatacgttagacgatccaaaacgtccgaaaaaatattctgcacagcaatatttccgcacc
gaagaagagatgtgtcgcctatttgccgacattccgagtgctttggcaaatacagtagaa
attgcaaaacgttgttcagtaactatacgtttgggcgaatatttcctaccaaatttcccg
actggtgaactttccaccgaagattatttagtgcaaaaatcccgagaaggcttggaagaa
cgacttgaatttttattcccagatgaagaagagcgtaaaaacaagcggtcggtttatgat
gaacgtttacaagttgaactagatgtcattaaccaaatgggctttcctggttatttcttg
atcgtgatggagttcattcaatggtcgaaagaaaatggtattcctgtaggacctgggcgc
ggttcgggtgcaggctcgcttgtagcgtatgcgttgaaaattaccgacctagatccactt
gaatttgatttgctctttgagcgttttttaaaccctgaacgtgtttcgatgccagacttc
gacgtggatttttgtatggatggtcgtgatcgagtgattgaccatgtggcagacacttac
ggtcgccaagcagtatcgcagatcatcacgttcggtacgatggcggcaaaagcagtaatc
cgcgatgtgggacgtgtgctggggcatccgtatagctttgtggatcgtatttcaaaattg
attccgttagatccaggaatgacgctcgaaaaagcctttgctgccgagccaaaattaccc
gagctttacgatagcgatgaagaagtgaaagcgttgatcgatatggcacgcaagcttgaa
ggtgttactcgaaatgcgggtaaacacgcaggcggcgtagtaattgcaccaactgcaatt
accgatttctctccactatattgtgactcggaagggatgcatcctgtaacccactttgac
aaaaacgatgtggaatatgcgggcttggtcaaattcgacttcttgggattgcgtacgctg
actatcattaagtgggcgttagaaatgattaacgcacgaatgctatcagaaggtaaagag
cctgtacggattgaaagtattccactggatgataaaaaatcgtttgatttattgttgcaa
tcgaaaaccacggcagtattccagttagagtctcgcgggatgaaagatctcatttctcgt
cttaagcccgactgctttgaagatattatcgcgttggtggcattgttccgcccaggtccg
ttagagtcagggatggtgcagaactttattgaccgtaaacatggcaaagaagaagtctct
taccctgatgcacaatatcagcacgaatgcttgaaaccgattttagagccgacctatggc
gttatcgtttaccaagaacaggtaatgcagattgctcaagaactggcgggctatacgctt
ggtggggcggatttattgcgtcgtgcgatgggtaagaaaaagccagaagagatggcggca
cagcgtgaaattttcgaaaaaggagcaatcaataaaggtattgatggtaatcttgcgatg
aaaatcttcgaccttgtggaaaaattcgcaggctatggctttaacaaatcacactcggca
gcctatgctttagtttcttaccaaacactttggcttaaagctcacttccctgctgaattt
atggcagcggtaatgtcttcagagatggataataccgacaaaattgtggggctttatgat
gaatgtatgaatatgggcttaactgttgtaccacctgatattaacagcggtaagcatcgt
ttttccgtaaatgaaaaaggtgaaattgtctatggcttgggtgcgattaaaggcgtgggc
gaaggtccgattgatacgattttatctgctcgccaacaagatggcattttcaaagatctg
tttgatttaactgctcgtgtcgatctgaaaaaaatcaaccgtcgcacctttgatgcgttg
attatgtcggggagcttggataaactcggcccgcaccgtgcagctttaatgaaaaactta
gaagatgctcttaaagcctcagatcaacattcaaaaatggaagcgcttgggcagagtgat
atgtttggtgtgcttactgaaacgccagaagaggtgcaaaatgcctatgcgaatacgccc
aaatggagtgaacaaactattttagagggcgaacgagccacattaggcttatatttgagc
gggcatccaatcggacgtttccttaaagagctggctcactatgcccctgttcgcttaaat
gagctgcaaccaacttttcgaggacaaaatgcaaccgtggcgggtatggtggtgggctat
cgtgtagccgtcactaaacgaggtagtcgcattggcattgcgaccattgaagatcgttca
ggcaggctagatattacgcttttctctgaagctttagaaacttacggagatttaattgag
aaagatggcattattatcgccacaggttcgatacagttcgacgattttagcggagggtta
aaaatgtccgcccgcgaaattatgacacttgatgatgcacgtactcgtaatgccaaaagc
cttgctcttgcaatcaatcaagaacaattagatgcaaaatttgtgaaagaattgaccgct
tgcattgcaccttacaaagaaggaaccttacctctgcatttctactaccaaaacgaacaa
ggtagagccttgttgaaaggaggcttagaatggcgagtgacaccaagcgaaaaaatgctc
gttgggcttcgagccttgctaggggaaagttcggtagaattagagtttgagtaa
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