Haemophilus parahaemolyticus: E5Q53_09370
Help
Entry
E5Q53_09370 CDS
T06595
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5Q53_09370 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_09370 (uvrB)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5Q53_09370 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5Q53_09370 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF7121
Mu_Gam-Sipho_Gp157-TOTE
DUF87
EAD9
Motif
Other DBs
NCBI-ProteinID:
QEN11610
UniProt:
A0AAE6MPS8
LinkDB
All DBs
Position
complement(1944210..1946228)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVTGSGKTFTIANVIAQLN
RPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVGAYMQMMLHLQVGDIIDQRTILSRLA
ELQYTRNDQAFQRSTFRVRGEVIDIFPAESDEVALRVELFDDEIENLSLFDPLTGHSLGR
VPRYTIYPKTHYVTPRERILEAIEQIKVELVERREYFIKENKLLEEQRITQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEPPPTLFDYMPADGILVIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLKFEEFEQLSPQTIYVSATPGAYELEKNPDVVDQVVRPTGL
LDPIIEVRPVTTQVDDLLSEIHKRVAVDERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAITETERRREKQMKYNEERSIVPQALNKKVGELLD
IGQTDKPKRGKKSAKVSENSTASYTPKSRKELEKELKQLEQQMRDFAKDLEFEKAAAVRD
KIQQIKTYLLEI
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaaggcaaaccttttattctgcatagtccattcaaaccctctggcgatcag
ccttctgcgattgccaaattaaccgaagggctaaatgatggcttggcacatcaaactcta
ttgggggtaacaggttcgggtaaaacctttaccattgccaacgtaattgcccagttgaac
cgccccgcaatgttgcttgcaccgaataaaacccttgccgctcaactttatgcggaaatg
aaagcctttttccccgaaaatgcggtggaatatttcgtttcttactacgattattaccag
ccagaagcttatgtcccaagcagcgatacttttatcgaaaaagatgcttcgatcaacgaa
cagattgagcaaatgcgactttctgcaaccaaatctttccttgaacgtcgcgacactatt
gtagtggcttccgtttccgctatttacggcttaggagatgtaggagcttatatgcagatg
atgctgcatctacaagtgggcgatattatcgaccaacgcaccattctttcccgacttgct
gagttgcaatatacccgtaacgatcaagccttccagcgttcaaccttccgtgttcgcggt
gaggtgattgatattttccctgcggaatcagacgaggtcgctttacgcgtggagctgttt
gacgacgagattgaaaatctttccctgttcgatccgctcactgggcatagtttggggcgt
gtgccacgttacaccatctacccgaaaacgcactatgtaacgcctcgagaacgcatttta
gaagcgattgagcagatcaaagtagagttagtggaacgtcgcgaatatttcatcaaagag
aataaattgctggaagagcaacgcattacccagcgcacccagtttgatatcgaaatgatg
aatgaactcggttattgctcgggtattgaaaactactcccgctatctctcgggtagaaaa
gagggcgaaccacccccgaccttatttgattatatgccagcggacggcattttggtgatt
gatgaatcgcacgttactgtgccacaaattggcggtatgtatcgtggcgaccgagcacga
aaagaaacgctcgtgcaatacggttttcgtctaccttcagcattggataaccgcccgctc
aaatttgaagagtttgaacagctttctccacaaactatttacgtttctgcgactcctggg
gcttatgaattagagaaaaatcctgatgtggtggatcaagtggtacgcccaacgggctta
cttgatccgattatcgaagtgcgcccagtaacaacccaagtagacgatttactttccgaa
attcataagcgagtggcggtcgatgagcgggtgttagtcaccactctcaccaaaaaaatg
gcggaagatttaaccgattatttggacgaacacggcgtacgtgtgcgttatttacatagt
gacatcgacaccgtcgagcgggtggaaattatccacgatttgcgaatggggatgttcgat
gtgctagttgggatcaacttattacgagaaggcttagatatgccagaagtctcgctggtg
gcgattttagatgccgacaaagagggcttcttgcgttccgaacgttcgcttatccaaacc
atcggacgtgccgcacgtaacctcaacggcaaagcgattctttacggtgatcgcatcacc
aattcaatgcaaaaagcgattaccgaaaccgaacgccgccgagagaaacagatgaaatac
aacgaagaacgcagcatcgtcccacaagcgttaaacaaaaaagtgggagaactgctcgac
atcggtcaaaccgacaaaccaaaacgtggcaaaaaatctgcaaaagtttccgaaaattct
accgcttcctacacaccaaaatcacgtaaggaattagaaaaagaacttaaacagctagaa
caacaaatgcgagattttgcgaaggatctggaatttgaaaaagcggctgctgtgagggat
aagattcagcagattaagacgtatttattggagatttaa
DBGET
integrated database retrieval system
