Haemophilus parahaemolyticus: E5Q53_09515
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Entry
E5Q53_09515 CDS
T06595
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5Q53_09515 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpaa03400
]
E5Q53_09515 (recB)
Enzymes [BR:
hpaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E5Q53_09515 (recB)
DNA repair and recombination proteins [BR:
hpaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5Q53_09515 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
ResIII
GyrB_insert
Motif
Other DBs
NCBI-ProteinID:
QEN11637
UniProt:
A0AAE6JTY5
LinkDB
All DBs
Position
complement(1977827..1981465)
Genome browser
AA seq
1212 aa
AA seq
DB search
MQTLNPLTLPLNCASLIEASAGTGKTHTIKNLYLRLLLGISHDGEPLEPLTVEQILVVTF
TKAATEELKDRIRQNIQDCYAYFSAKLTEQAVKNDDFFAELFEKVEKKEEALLRLRIAER
EIDLASVFTIHSFCQKMLYQFAFDSGISFEFELQKNEQQLLERLAQEVWREQFYPMNLSE
TSIVADELKTPQDALDAVRTYLTETLPELNDDQQGINQPFAEHLKAYQQLLTEVRQYWRA
NREEIVSPIINELDKKYKTGVKKALNRRSYQMRYLENWLKSVDEWAESEAIYFPAEHFSR
FCQTSLIEKAEEGAEPLTSTHFATNQAFLTAYQSQFEAKQKSVLLYQFLMRLREKLAAYK
ATHPEKSFDDLLIMLNQALKNTRGKQLASQIRQQYPFAMIDEFQDTDQTQYEIFSQIYMA
EEAQNQGFIMIGDPKQSIYKFRGADIFTYLKASEQADEKRTLDKNWRSLPKVVEAVNQIF
TFPENSGNHPFLYQGIPFQAVKAKTPEAELIGSENVVCYLQPEFKENEAAEHCADQIQKQ
LMAMQADEIYLQNVQSGEKSGFEAKDIAILVRSNNQAKLMKLALAKRGLKSVFLSERSRV
YESEVAPELAWVLKACLNPYQQKTLLCALGSSLWGLTAQEIYQLKNDEQQWENYVDKFVH
YQQIWQSQGVLPMLHQLFLQEGVVERLKARVNADRLLTDLFHLAEILQSAMQEVENESAL
VRWYEQTLNDAENGDDTHTLRLESEEALIKIVTIHGSKGLQYPVVWLPFIGKNSTSVKAF
ALSIYHDENAQKQWDFGGREEAIQQLKNQAEYAEDLRLLYVALTRAESQLNLILPTQFGK
GWNSIHYLLSNGEIGLTGTETSSSTETYFAEKGLNCTLQTLAESAEEHFWSPEQETAELL
QVREFNHTIPTVQGQITSFSALSNYNDWALESHNKAQTDYFTEINDFAQDYDNQTAYSEP
LVEVGIEQAGDFVEETANSLNAYQFPHSTKVGNILHRFMEHCDFQQAVKIEDILPICEQL
NLGEEWQAPVQHWIEQVRTTPFAENLALSDLANEYRLNEWQFFLCLKNEEGLRKLNQLLQ
EQSELARQLPPLRLPQLSGYVRGFIDCIAKANGKFYVIDYKSNFLGYLPQDYRQTRLAKT
IGQYRYDLQYLLYTLAVHRYLRARLGESYDYDRDFGGVAYLFLRGMNGEPNSGVYFDKPS
KALIDGMDLLFS
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgctcaaccctctcacacttccgcttaactgtgccagcctgattgaagcctcg
gctggcacgggcaaaacacatacaatcaaaaacctctatcttcgtttattactgggcatc
agccacgatggtgaaccactagaaccattaacagttgaacaaatcttagtagtaactttt
accaaagcggcaactgaagaacttaaagaccgtatccgccaaaatattcaagattgctac
gcctatttttcggcaaaactcaccgagcaagcggtgaaaaatgatgatttttttgcagaa
cttttcgagaaagtcgaaaagaaagaggaagcgttgctccgcttgcgaattgccgaacga
gagattgatttggcgagtgtgtttaccattcacagcttctgccaaaagatgctctatcaa
tttgcattcgattcgggtatcagttttgagtttgaactgcaaaaaaacgaacagcaattg
cttgaacgccttgcccaagaagtttggcgtgagcagttctacccgatgaatttgagcgaa
acaagcattgttgcggatgagcttaaaacaccacaagacgcattggatgcggtgcgaact
tatctgacagaaactttgcctgagttaaacgacgatcaacaaggcattaaccaacctttt
gccgagcatttaaaagcctatcaacaattattgacagaagttcgccaatattggcgtgcc
aaccgtgaggaaattgtaagcccaatcatcaatgaactggataaaaaatataaaactggc
gtgaaaaaagcattaaatcgccgctcatatcaaatgcgttatctggaaaattggttaaaa
tcggtagacgagtgggcagaaagtgaagccatttatttccccgcagagcatttttcacgc
ttttgccaaacaagccttattgaaaaagcagaagagggagcagaacccctaacatcaacg
catttcgcaaccaatcaagcatttttgaccgcttatcaaagccaatttgaagcaaaacag
aaatcagtcttgctttatcaatttttaatgcgtttgcgggaaaaattggctgcttataaa
gccacacaccctgaaaaaagttttgatgacttgctgattatgcttaatcaggcgttgaaa
aacacacgaggaaaacagctcgcaagccaaattcgtcaacaatatccgtttgcgatgatt
gacgaatttcaagacaccgaccaaactcaatacgaaatctttagccaaatctatatggca
gaagaggctcaaaatcagggttttattatgattggcgatccaaaacagtcgatctataaa
ttccgtggagcagatatttttacctatttgaaggcctcggagcaagcggatgaaaaacgt
accttagataaaaactggcgttctttgccgaaggttgttgaagcagtaaatcagattttt
accttcccagaaaatagcggaaaccatccgtttttatatcaaggcattccatttcaagcg
gtaaaagccaaaacgccagaggcagaattaatcggtagtgaaaatgtggtttgctatttg
cagcctgaatttaaagaaaatgaagcggctgagcattgtgccgatcaaattcaaaagcaa
ttgatggcaatgcaagcggacgaaatttatctacaaaatgtccaaagtggagagaaaagt
ggctttgaggcgaaagatattgcgattttggtgcgaagcaataatcaagctaaattgatg
aaactcgccttagctaaacgaggtttgaaatccgtttttctctctgagcgtagccgtgtt
tatgagagtgaagttgcaccagaattagcgtgggtattaaaagcctgcttaaatccgtat
caacagaaaaccttgctttgtgccttgggttcgagcttgtggggcttaactgcacaagag
atttatcagcttaaaaatgatgagcagcaatgggaaaactatgtcgataaattcgttcat
tatcaacagatttggcaatcgcaaggtgtgctaccgatgttacatcaactcttcttgcaa
gaaggtgtggtcgaacgattgaaagcccgagtaaatgcagatcgtttattaaccgaccta
ttccaccttgcagaaattttacaatcggcaatgcaagaggtggaaaacgagagtgcgtta
gtgcgttggtatgaacagacgttaaacgatgccgagaatggtgacgatacccacacttta
cgtttagaaagcgaagaggcgttgattaaaatcgtgactattcacggctcaaaagggttg
cagtatcctgtcgtttggctgccgtttattggtaaaaacagcaccagcgtaaaagcattt
gctctttctatttaccacgatgagaatgctcaaaagcaatgggattttggcggaagagag
gaagccatccaacagctcaaaaaccaagcagaatatgcggaagatctacgtttgctttac
gttgctttaacccgtgctgagtcgcaacttaacttgattttgccaactcaatttggcaaa
ggttggaatagtattcactatttgcttagcaatggcgaaatcggtttaacgggtactgaa
accagcagtagcacagaaacctattttgcagagaaaggattaaattgcacgttacaaacg
cttgcagaaagtgccgaagaacatttttggtcgccagagcaagaaacggcagaattatta
caagtgcgtgaatttaaccacacaatcccgacagttcaaggacagatcacgagttttagt
gctttaagcaactataacgattgggcattagaaagccacaataaggctcaaacagattac
ttcaccgaaatcaacgattttgcacaagattacgataatcagaccgcttacagcgagcca
ttagttgaggtaggcatagaacaagcgggcgattttgtggaagaaactgcaaatagttta
aacgcttaccagttcccgcatagcaccaaagtagggaacattttgcaccgttttatggag
cattgcgacttccaacaagcagttaaaattgaagatattttgccaatttgcgaacagctc
aatttaggtgaagagtggcaagcacccgtgcaacactggatagaacaagtccgcactaca
ccatttgcggagaatttagcattaagcgatcttgccaatgaatatcgcttaaatgaatgg
caattcttcttatgcctaaaaaatgaagagggcttacgcaaactcaatcagctattacaa
gaacagagtgaattggctcgtcaattaccaccattgcgattaccgcaactttcaggctat
gtgcgcggttttattgactgtattgccaaagcgaatggcaaattttatgtaattgattat
aaatcgaacttcttaggctatttgccgcaagattaccgccaaacacgccttgcgaaaaca
ataggacaataccgctacgatttacaatacttgctctacaccctcgcggtacatcgttat
ctacgtgctcgcctaggtgagagttacgactacgaccgagattttggcggcgttgcttat
ttattcttacgtggaatgaatggcgagccgaatagcggcgtgtattttgataaacctagc
aaggcattgattgacggaatggatttgttgtttagttaa
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