Haemophilus parahaemolyticus: E5Q53_09650
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Entry
E5Q53_09650 CDS
T06595
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpaa
Haemophilus parahaemolyticus
Pathway
hpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5Q53_09650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpaa03019
]
E5Q53_09650
03009 Ribosome biogenesis [BR:
hpaa03009
]
E5Q53_09650
Enzymes [BR:
hpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E5Q53_09650
Messenger RNA biogenesis [BR:
hpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5Q53_09650
Ribosome biogenesis [BR:
hpaa03009
]
Prokaryotic type
rRNA helicases
E5Q53_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QEN11664
UniProt:
A0AAE6JTH2
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All DBs
Position
2011423..2013222
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AA seq
599 aa
AA seq
DB search
MTETTMTFADLGLPQSILDAVNDMGFVTPSPIQQECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLAQIDPEARHPQMLVMAPTRELAIQVADACEQFTKNMKGVRVVTVYGGQRYDIQLR
ALKQGSQVVVGTPGRILDHINRGTLNLSQLKFIVLDEADEMLRMGFIDDVETVMAELPEQ
HQTALFSATMPEPIRRITKRFMNDPQEVKIKATQRSAPDITQSYWMVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALNGDMTQQAREQTLDKLKSGRLDILV
ATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNI
EHLIKKPIDEVAIPNHEILMAKRREKFKARIESQLEHHDLEKYRALLEDLFTGDQDHEEL
AAAMMMLLQEKQKLILPPDPVVKPSRERGRRDRNERGDRRDDRRSGREQREGTGVAMDLY
RIELGREDGVEVRHIVGAIANEGDISSRFIGHIKLHDTYSTIELPQGMPNHLVQHFAQKA
RVLNKQMQMSLLGPVDGANSQPFEGRGRGERNDRRRDRGFNDRKKGGFKEKRFNDRGRR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacaacaatgacttttgccgatttaggcttaccacaatctatccttgatgct
gtaaacgatatgggttttgtgaccccatcgccgatccaacaagagtgtattccacattta
ttaaatggtcgcgatgtactaggtatggcacaaacaggcagtggtaaaacggcagcgttc
tctcttcctcttcttgcacaaattgatcctgaagctcgccatccacaaatgttagtgatg
gcaccaactcgcgaacttgcgattcaagtagcagacgcgtgtgagcaatttactaaaaat
atgaaaggtgttcgtgttgtgaccgtttatggtggacaacgttacgacattcaacttcgt
gcgttaaaacaaggctcacaagtagtggtgggcacaccaggtcgtattcttgaccatatc
aatcgcggtacattaaatctttcacaacttaaattcatcgtattagatgaagcggacgaa
atgttgcgtatgggctttattgatgatgttgaaacggtgatggcagaattaccagaacag
caccaaacggcactattctctgcgacaatgcctgagccaattcgccgtattaccaaacgc
tttatgaacgatccgcaagaagtgaaaatcaaagcgactcagcgttcagcaccagacatt
actcaaagctattggatggtaaacggtttccgtaaaaatgatgcattactacgtttctta
gaagtggaggagtttgatgcagcgattatttttactcgcaccaaaacaggcactatcgat
attacggaactttgcgaacgcaacggctatcgcactgcagcgttaaacggtgatatgacc
caacaagcccgtgagcagactttagataaactaaaatcaggtcgtttagatattttagtg
gcaacagacgtagctgcacgtggtatcgacattgaacgcatcagccttgtggtaaactac
gatattccgcttgatgcagaatcttacgtacaccgtattggtcgtacaggtcgtgcaggt
cgttctggtcgtgcattgttatttgttgaaccacgtgagcgtcgtttattacgcaacatt
gagcatcttatcaagaaaccaatagatgaagtggcgattccaaaccacgaaattctaatg
gcaaagcgccgtgagaaattcaaagcacgtattgaatcacaattagagcaccatgattta
gaaaaatatcgtgcattattggaagatttatttactggagatcaagatcacgaagaactt
gctgctgcaatgatgatgttacttcaagaaaaacaaaaactgattcttcctccagatcca
gtggttaaaccaagtcgcgaacgtggtcgccgtgaccgcaatgaacgtggtgatcgccgt
gatgatcgccgcagtggacgcgaacaacgcgaaggcacaggcgtagcgatggatttatat
cgtatcgaattaggtcgtgaagatggcgtagaagtgcgtcatatcgtgggggcaattgcc
aacgaaggggatattagtagccgtttcattggccacattaaattgcacgatacttattca
accatcgagcttccgcaaggtatgccaaaccacttggtgcaacactttgcccaaaaagca
cgcgtgttgaacaagcaaatgcagatgtcgctgttaggtcctgttgatggtgcaaacagc
caaccgtttgaaggacgaggccgtggtgaacgtaatgatcgacgtcgtgatcgtggtttt
aacgaccgcaaaaaaggcggttttaaagagaaacgttttaacgatcgtggtcgtcgttaa
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