Glaesserella parasuis KL0318: JT17_00200
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Entry
JT17_00200 CDS
T03312
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hpak
Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpak03016
]
JT17_00200
Enzymes [BR:
hpak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JT17_00200
Transfer RNA biogenesis [BR:
hpak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JT17_00200
Prokaryotic type
JT17_00200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AIK89294
LinkDB
All DBs
Position
48771..49688
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AA seq
305 aa
AA seq
DB search
MGRPKKKGRDVHGVFLLDKSQGVSSNDIMQKVKRLFNANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYRVIAKLGERTDTSDADGQVVQTREVKVEIVDILAALEAFRGDIL
QVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELLFVEYQAPYLTLEVHCSKGTYI
RTLVDDLGEALGCGAHVTMLRRLAVADYPVEKMMTLGDLQNLAENQPLVELDQLLLPMDS
AVARLPHLDLTDEQTKAVGFGQRVKFDNLKGIYGQVRLFSAEKLFLGVAEITADNVIRPS
RMVNR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaccaaagaaaaaaggacgtgatgttcacggtgttttcttattggataagtcg
caaggcgtgagttctaacgacattatgcagaaggtaaaacgcctgtttaatgcgaataag
gcagggcatacgggggcgttagatccgcttgctacgggtatgttgccgatctgtttaggt
gaggcgaccaagttttctcagtttttgttagatgcggataagcgttatcgggtgatcgca
aaattgggggagcggacggatacttctgatgctgatgggcaagtggtgcagacgcgtgaa
gtgaaggtcgaaattgtagatattttggcggcacttgaggcatttcgtggtgacattttg
caagtgccgacgatgttttctgccttaaaacataatggtaagccgttatatgaatatgct
cgagctggtattactgtggagcgtgaggctcgcccgattacgatttttgagctgttattt
gttgagtatcaagcaccttatttgacattggaagtgcattgttctaagggaacttatatt
cggacgttagttgatgatctgggtgaggcgttgggttgtggcgctcacgttacgatgttg
cgtcgtttggcggttgctgattatcctgttgagaagatgatgacattgggcgatttgcaa
aatttagcggaaaatcagccgcttgttgagttagatcagttgttgttgccgatggatagt
gcggtggctcgtttgcctcatttggatttaactgatgaacagacaaaagcagtgggtttt
gggcaacgtgtgaaatttgataatctgaagggaatttatggacaagtacggttgttttca
gcagaaaagctgtttttaggcgttgctgaaattaccgcggataatgtgattagaccaagt
agaatggtcaatagataa
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