Glaesserella parasuis KL0318: JT17_01950
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Entry
JT17_01950 CDS
T03312
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hpak
Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpak03032
]
JT17_01950 (gyrB)
03400 DNA repair and recombination proteins [BR:
hpak03400
]
JT17_01950 (gyrB)
Enzymes [BR:
hpak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JT17_01950 (gyrB)
DNA replication proteins [BR:
hpak03032
]
Prokaryotic type
DNA Topoisomerases
JT17_01950 (gyrB)
DNA repair and recombination proteins [BR:
hpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JT17_01950 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AIK89589
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All DBs
Position
362394..364826
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AA seq
810 aa
AA seq
DB search
MSEQNQPNSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGY
CNDIVVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGL
HGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGDPDAPLAVIGETEKTGTTVRFWPSYDI
FKNKTEFEYAILSKRLRELSFLNSGVSIRLVDERNDKEEHFKYEGGIRAYVEYLNEGKNV
IHPTPFYLSTEKDDIGIEISMQWNDSFNENVYCFTNNIPQRDGGTHLAGFRGALTRALKN
YMETGAKLKKEDAKIDASGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVRNPLESSM
NEALQEYLLENPNDAQNIVTKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEK
DPALSELYLVEGDSAGGSAKQGRDRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITA
LGAGIGRDEYNIEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGYVYIAQPP
LYKVKKGKQEKYIQDNTEMEQYELALALDGASLYVSDKAPALNGLALEKLIAEYNDVQKL
FERLTRRYPTALLNELIYQPALTTEFVKNETEVTAWNNKIVEILTAKETSGSTYVAEVFY
NAERHIYEPQVIVTTHGISTTYCLDFNFITSNEYTRITKLGEQVSDLLEPTAYVQRGERQ
QSIESVAEAIDWLVKESRKGLTIQRYKGLGEMNPEQLWETTMDPVARKMLQVTITDAIAA
DKLFTTLMGDEVEPRRDFIENNALYANLDI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaaaatcaaccaaatagctatgattcttctagcattaaagtattacgtggt
cttgatgctgtacgtaagcgtccaggtatgtatatcggagatactgatgacggcacaggt
ttacaccatatggtttttgaagttgtggacaatgcaatcgatgaggctttagctggttac
tgtaatgatattgtcgtgactattcattcggacaattcagtgtctgtgcaagatgatggg
cgaggtattcctgtggggattcaccctgaagaaggagtgtctgcggcggaagttattatg
accgtattacacgcaggcggtaagtttgacgataattcttacaaagtatcaggcggcttg
cacggggttggggtgtcagtggtaaatgccctctcgtccaaacttcaactgactattcgt
cgtgaaggtcacgttcacgaacaattttatagtttaggagatcctgatgcacctttagca
gtaattggcgaaacagaaaagacaggaacaaccgtccgtttctggccgagttatgatatt
ttcaaaaataaaacggaatttgaatatgcgattttatctaaacgcttacgtgaactttca
ttcttaaattcaggtgtatcgattcgcttagttgatgaacgtaatgataaggaagaacat
ttcaaatatgagggtggtatccgtgcttatgttgaatatttgaatgaaggtaaaaacgta
attcacccaacgccattttatctttcaacagaaaaagatgatataggcattgaaatttca
atgcaatggaatgatagttttaacgaaaatgtatattgtttcaccaataatattccacag
cgtgatggcggtacgcacttagcaggtttccgtggtgcattaacccgtgccttgaaaaac
tatatggaaacaggggcaaaactaaaaaaagaagatgccaaaattgatgcgtcaggtgat
gatgcacgtgaaggtttagtcgctgttatttcagtgaaagtaccagatccaaaattctct
tctcaaacaaaagataaattagtttcttctgaagttagaaatccattggaaagctcaatg
aatgaagcactacaggaatatctattagaaaatccaaatgatgctcaaaatattgtgact
aaaatcattgatgcagcccgtgcccgtgaagcagcacgtaaagctcgtgaaatgactcgt
cgtaaaggcgcattggatttaggggggttaccgggtaaattggcagactgccaagagaaa
gatcctgcattatctgaactttacttagttgagggggattctgcaggtggctccgcaaaa
caagggcgtgatcgtaaaaaccaagcgattttaccgttaaaaggaaaaatcttaaacgta
gaaaaggcacgttttgacaaaatgctttcttcacaagaagttgcgacgttaattactgca
ttaggtgcaggtattggtcgtgatgaatataacattgagaaattgcgttatcataaaatt
attattatgaccgatgcggacgtcgatggtgcacacatccgtaccttgcttttgacattc
ttctatcgtcaaatgccagaattaattgaacgtggttatgtctatattgcacagccacca
ctttataaagtgaaaaaaggtaagcaagagaaatatattcaagataatacggaaatggag
caatatgaattagcattagccttagatggtgcttcactttacgtaagtgataaagcgcca
gcattaaatggcttagcacttgagaaattaattgctgaatataatgatgttcaaaaattg
tttgagcgtttaacccgtcgttatccaactgctttactgaatgaattaatttatcagcca
gccctcacgacagaatttgtaaaaaatgaaactgaagtgaccgcttggaataacaaaatt
gttgagatcttaacagctaaagaaactagtggaagtacttatgttgcagaggtattttat
aatgcagaacgccatatttatgaacctcaagtaattgttactacacacggaattagcaca
acttactgtttggatttcaattttattacaagtaatgaatatactcgtattactaaatta
ggcgaacaagtaagcgatctccttgaacctacagcgtatgtacaacgtggtgaacgccag
caatcaatagaaagtgttgccgaagccattgattggttggttaaagaatctcgtaaaggt
ttaaccattcaacgttataaaggcttaggtgaaatgaaccctgagcagctttgggaaaca
acgatggatcctgtagcacgtaagatgttacaagttactattactgatgcaattgcagca
gataaactctttacaacattaatgggtgatgaagtagaaccacgtcgcgattttatcgaa
aataatgccttatatgcaaatttagacatttaa
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