KEGG   Glaesserella parasuis KL0318: JT17_03180
Entry
JT17_03180        CDS       T03312                                 
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
  KO
K06958  RNase adapter protein RapZ
Organism
hpak  Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:hpak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpak03019]
    JT17_03180
Messenger RNA biogenesis [BR:hpak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     JT17_03180
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_22 AAA_33 AAA_18 SKI AAA_16 AAA_28 US30
Other DBs
NCBI-ProteinID: AIK89810
UniProt: A0A6I5WQR2
LinkDB
Position
complement(625485..626345)
AA seq 286 aa
MELIIMSGRSGSGKSVALRALEDLGYYCVDNIPLALIPQLTDYLEKLKRSVVVSLDVRNL
PEDPDVLEQVLHAFPSHISKTLIFLDCQRKALVRRYSDSRRLHPLSTHDLSLENVIDLEN
HLLEPLFQHADYIIDTTYFSSHELAEKLRELLNGSSEKELNIIVESFGFKYGIPADADYV
FDVRFLPNPHWNLELRPMTGLEKPVIDFLENQSEVHQFISHTCNYLEVWLPLLEQNNRSY
LTIAIGCTGGKHRSVFVAEKLARYIESKGKKVRVRHCSLEKHYKTS
NT seq 861 nt   +upstreamnt  +downstreamnt
gtggaattgattattatgagcgggcgatctggttcaggaaagtctgttgcgttaagagcg
ttggaagatttagggtattattgcgtggataatattcctcttgctttaattccccagtta
acagattatttagaaaaattgaagagatctgttgttgttagccttgatgtgagaaattta
ccagaagatccagatgtgcttgagcaagtattacatgcgtttccctctcacatttcaaaa
actttaatctttcttgattgtcagcgtaaggctttagtccgtcgatatagtgactctcgt
cgtttacatccattatctacccatgatttatctttagaaaatgtgattgatttagaaaat
catcttcttgaaccattatttcagcatgcggattatattattgatacaacgtacttttct
tcacatgagttagcagagaaattaagagaattattaaatggatcatcggagaaagaattg
aatattattgttgaatcttttggttttaagtatggcattcctgccgatgcagattatgtt
ttcgatgtccgttttttacctaatccccattggaatcttgagctccgtcctatgacagga
ttagaaaaacctgttatagattttctagaaaatcagtcagaagtccatcaatttatttct
catacttgtaattatttagaagtgtggttgcctttattggagcaaaataataggagttat
ttaacgattgccataggctgtacaggcggaaagcaccgttctgtatttgttgcagagaaa
ttagccagatatattgaaagtaaaggcaaaaaagtaagagttcgtcactgtagtttagaa
aaacattataagacatcgtag

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