Glaesserella parasuis KL0318: JT17_04265
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Entry
JT17_04265 CDS
T03312
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hpak
Glaesserella parasuis KL0318
Pathway
hpak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JT17_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpak03400
]
JT17_04265
Enzymes [BR:
hpak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JT17_04265
DNA repair and recombination proteins [BR:
hpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JT17_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
AAA_11
UvrD-helicase
SLFN-g3_helicase
Viral_helicase1
AAA_22
DEAD
SH3_13
nSTAND3
AAA_16
AAA_5
UvrD_C
DUF7214
HerA_C
AAA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AIK90016
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All DBs
Position
857601..859562
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AA seq
653 aa
AA seq
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MLPLLYALKTENVISELNYQFAKMIDQKQQAYNYTVQQQNVAIFLSALVSFNVMQGHSCV
RLNSDLTTHFFDLQKKHFSRDFHTEILQKIEGISPLEWQSLLHNHVAFSQDPTQVAPLLF
QQDRLYFYRYWQAEYRVARYLQQAVSSDLKKADIDLHRQILQRFFPKQADTDWQKIAVAT
ALTKRFCLISGGPGTGKTRTVAILLAALQLKQLEQNQPLLKIALAAPTGKAAARLKESIS
NNLASLDLPDSLKAEVPTRASTIHSLIGINLHSDLPRHHTQNPLHLDLLVVDEASMIDLF
ILEKLLNALKPDTRLIMLGDKDQLASVEAGNLMGELGSLIRFGYSNEHSDYLTEVTEHQI
YPTVENVPAICNSLCHLRRSFRFDENSGIGQLAKQVNTQQAVKSWQILTNRAYDDLTLAC
YPKVTDFPEKSQWIQYCVNSVVEKAVELYSDYLNKVKARVLSPEAVSIGEIFKAFQQVRF
LSALRVSELGVERLNQTIAEALLQARLLHFKHSRDSYIGKPILITENAPQLHIFSGDIGL
ILPDEAGRLRVYFETEQNGKHLDISLSRLPSYEPAYVMTVHKSQGSEFDHTLLVMPLSHS
PVLTKELIYTAITRAKKQFTLFSEEKIWKQAVKAEIQRQSGLKEQILADILMK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctactttatgccttaaaaacggagaatgtgatttctgaattaaactatcaa
tttgcaaaaatgatcgatcagaaacagcaggcttataactatacggttcaacaacagaat
gtagcaatctttctaagtgcattagtttcttttaatgttatgcaaggacatagttgtgtt
cgtttaaattctgatttaacaacccacttttttgacttgcaaaaaaagcatttcagccgt
gattttcatacggagattttgcaaaaaattgaggggatttcaccgctagagtggcagtcg
ttgctacataaccatgttgcttttagccaagatcctacacaggttgcacctttattattt
caacaggatcgtctatatttttatcgttattggcaggcagagtatcgtgtagcacgttat
ttacaacaagcggtaagttcggatttaaaaaaagcagatatcgatcttcatcgtcaaatt
ttacaacgcttttttccaaaacaagctgatacggattggcaaaaaattgcggttgcaacg
gcattaactaaacgattctgtctgatttcaggcgggcctggcacaggcaaaacccgaaca
gttgctattttacttgcagcattacagcttaaacaattagaacagaaccaaccgctttta
aagattgcccttgctgctccgacaggaaaagctgcggctcgtttaaaagaatctatttca
aataatctcgctagtcttgatcttcctgacagtttgaaagctgaagtacccactcgagct
tcaacaatccattcgttaatcggtattaatctccatagtgatctacctcgccatcacact
caaaatccactgcatttagatttgttagtcgtggacgaagcgtcaatgatcgatctcttc
atactggaaaaactgctgaatgccttaaaaccagatactcgtttgattatgcttggggat
aaagatcaacttgcttctgtagaagctggaaatttaatgggggagttgggtagtttgatc
agatttggttatagcaatgagcatagtgactatctaaccgaggtaacagaacatcaaatt
tatcctacagtggaaaatgtccccgcaatttgtaattcattatgtcatcttcgtcgaagt
tttcgttttgacgaaaattcagggattgggcagttagctaaacaagtgaacacccaacaa
gcggtgaaatcgtggcagattttaacgaatagggcttatgatgatttaacattagcgtgt
taccctaaagtcacggattttcctgaaaaatcacaatggatacaatactgtgtaaatagc
gtggtagaaaaagcggtggagttatattccgattacttgaacaaagtgaaagctcgagta
ctttccccagaagccgtgtctatcggtgagatatttaaagcattccaacaagtacgcttt
ttgtcagccttacgcgtcagtgagttgggcgtagaacggcttaatcaaaccattgcagaa
gcattattgcaagcacgtctattgcattttaaacatagccgagacagctacattggcaag
ccgattttgattaccgaaaatgcccctcaacttcatatctttagtggtgatattggctta
attcttccagatgaagcaggaagattgagagtatattttgaaacagaacaaaatggaaaa
catttagacatttcccttagtcgtttgccaagttatgaacccgcctatgtaatgaccgtg
cataaatcacaaggttctgaatttgatcatactttattggtaatgccactttctcattcg
ccagtattaacaaaagaactgatttatacggcgattacccgtgctaaaaaacagtttacc
ttgtttagtgaagaaaaaatttggaaacaagcagtaaaagcagaaattcaacgacaaagt
ggattaaaagaacaaatattggcagatattttaatgaaatga
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