Glaesserella parasuis KL0318: JT17_04570
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Entry
JT17_04570 CDS
T03312
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hpak
Glaesserella parasuis KL0318
Pathway
hpak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JT17_04570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpak02000
]
JT17_04570
Enzymes [BR:
hpak01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JT17_04570
Transporters [BR:
hpak02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JT17_04570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
DEAD
AAA_22
nSTAND3
G-alpha
AAA_29
AAA_25
AAA_30
Lactamase_B_5
MMR_HSR1
AAA_24
ABC_membrane_2
DUF5906
SLFN-g3_helicase
Zeta_toxin
AAA_15
DUF87
AAA_18
APS_kinase
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AIK90064
LinkDB
All DBs
Position
complement(912316..914064)
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AA seq
582 aa
AA seq
DB search
MTQDHSTWQTFKRLWPMISLFKIGIIVAMVAMIFNAAADAYLITMLKPLIDDGFGVDSDR
NFLKVMAFIVVGLIFARGITSFISAYCLAWVSGKVVMTMRQKVFKHLMFMPVTFFDQNSS
GRLLSRITYDSEQVASSSANALQSMVREGIYIVFLVTTMFYYSWRLSLVLFIIGPVIAVL
IRVVSKRFRKLSRNMQESMGSMTESAEQMLRGHKVVLSFGGQKVEEERFNHTSNDMRRKG
MKMMAASTIADPIIQVIASLALAVVLFVAGSPEIIGDDLTAGEFAAVIGALMGILRPLKT
LTNVNAQFQRGMAASQTLFTLFDLPTEKNEGTYQIERAKGDIRFENVTFTYFGKEQPALK
NISFNLPAGKTLALVGRSGSGKSTIANLITRFYEIDSGNIYLDDHKIQEYTLNNLREQCA
IVSQQVHLFNDTIANNIAYAAKDKYSREQIEAAAKAAYAMEFIEKMSQGLDTVIGENGVS
LSGGQRQRLAIARALLRNSPVLVLDEATSALDTESERAIQAALDELQKDRTVLVIAHRLS
TIENADEILVVDQGEIIERGSHKVLLEKGGAYKQLYQMQFSE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ataactcaagaccactctacttggcagacatttaaacgcctatggcctatgatttccctt
tttaaaatagggattattgtggcaatggtggcaatgatatttaacgctgctgccgatgca
tacttgatcacaatgcttaaacctttgattgatgatggctttggcgttgactctgatcgt
aactttttaaaagtgatggcatttattgtcgtaggcctaatttttgctcgtggtatcacc
agctttatttctgcctactgtttggcgtgggtgtctggtaaagttgtgatgacaatgcgt
caaaaagtatttaagcatttaatgtttatgcctgtaacattttttgaccaaaactcttca
ggaagattactttcccgtattacctatgattctgagcaagtagcaagttcttcggcaaat
gcgttgcaaagcatggtccgagaagggatctacattgtctttctcgtcacaacaatgttt
tattatagctggcgtttatcccttgttcttttcatcattggtcctgtgattgcggtatta
atccgagttgtgtcaaaacgctttcgtaaactcagccgtaatatgcaagaatctatggga
agcatgaccgaaagtgccgaacagatgttgcgtggacataaagtggtgttatcgtttggc
ggacagaaagtcgaagaagaacgcttcaaccataccagtaacgatatgcgtcgcaaagga
atgaaaatgatggcagcaagtacgattgccgatccgattattcaagtgatcgcttctcta
gccttagcggtggtgctttttgtcgcaggttcgcctgaaattattggtgatgatttaacg
gcaggggaatttgctgcggttataggggcgttgatgggaattctacgtccattaaaaact
ttaaccaacgttaatgcccagttccaacgaggaatggcggcaagccaaacgctctttacc
ttatttgatttaccaacagaaaaaaatgaaggcacttatcaaattgaacgagccaaaggc
gacattcgttttgaaaacgttacctttacttattttggtaaagaacaacccgctttaaaa
aatatctcgtttaatttacctgcagggaaaaccttagcgttagttgggcgttcaggctca
gggaaatcgaccattgcgaatttgattacccgtttttatgaaattgattcgggcaatatt
tatcttgatgatcataaaattcaagagtatactttaaacaatttgcgtgaacagtgtgca
attgtttctcaacaggttcatctatttaacgacaccattgcgaataacattgcctatgca
gctaaagacaaatacagtcgtgagcagatcgaagctgcagctaaagccgcttatgcgatg
gaatttatcgaaaaaatgtcacaaggcttggatacagtaattggtgaaaacggggtaagt
ctatctggtggacagcgtcagcgtttggcgattgcccgtgccttattaagaaattcgcct
gttttagtcttagatgaagctacttcagcgttagataccgaatcagaacgtgcaattcaa
gcagcccttgatgaactacaaaaagatcgcactgttttagtgattgctcaccgcttgtct
accattgaaaacgccgatgagattttagtggtggatcagggagagattattgaacgcgga
tcacacaaagtcttgctggaaaaaggtggtgcttataaacagctatatcaaatgcaattt
agtgaataa
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