Glaesserella parasuis KL0318: JT17_07455
Help
Entry
JT17_07455 CDS
T03312
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpak
Glaesserella parasuis KL0318
Pathway
hpak00541
Biosynthesis of various nucleotide sugars
hpak01100
Metabolic pathways
hpak01250
Biosynthesis of nucleotide sugars
Module
hpak_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JT17_07455 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpak01005
]
JT17_07455 (rfaD)
Enzymes [BR:
hpak01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JT17_07455 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpak01005
]
Core region
JT17_07455 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AIK90555
UniProt:
A0A084F039
LinkDB
All DBs
Position
1487651..1488577
Genome browser
AA seq
308 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNAIGRTDILVVDNLKNGEKFVNLVDLDIADYCDKEDFIASI
IAGDDFGEIDAIFHEGACSATTEWDGKYLMQNNYEYSKELLHFCLDRQIPFFYASSAATY
GGRSDNFIEERKFEQPLNVYGYSKFLFDEYVRKILPEAESPVCGFKYFNVYGPREQHKGS
MASVAFHLNTQILKGENPKLFEGSETFLRDFVYVEDVAQVNIWAWQNGISGIFNLGSGNA
ESFRAVADAVLAFHQKGQIETIPFPDHLKSRYQTFTQADLTKLRAAGYDKPFKTVAEGTK
AYMEWLNR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaacaggaggtgctggctttatcggtagcaatattgttaaggcgttaaat
gcaatcggtagaaccgatattttagtggtagataacctgaaaaatggtgagaagtttgtt
aatttagtcgatttagacattgcagattattgtgataaagaagattttattgcatctatt
attgcaggcgatgattttggtgagattgatgcgattttccacgagggggcttgttcagca
acgacggagtgggacggtaaatacttaatgcaaaataactatgagtattctaaagagttg
ttgcatttctgtttagatcgccaaattcctttcttttatgcgtcaagtgcggcgacctac
ggcggtcgttcggacaactttattgaagagagaaaatttgaacagccgttaaatgtttat
ggctattctaaatttttgtttgatgaatatgtgcgtaaaattttgcctgaggcagagtcg
ccagtgtgtggctttaagtatttcaatgtgtatggtccacgcgaacagcataaaggctcg
atggcaagtgtggcgttccatttgaatacgcaaattcttaaaggcgaaaatccgaaacta
tttgaaggttcggaaacatttttgcgtgattttgtgtatgtggaagatgtcgctcaggtg
aatatttgggcgtggcaaaatggtatttcgggaattttcaatctaggttcgggcaatgcg
gagtctttccgtgccgttgctgatgcggtgctggcgttccatcaaaaagggcaaattgaa
actattccattcccagatcatttaaaatctcgttaccaaacctttacccaagctgattta
accaaactgcgtgcggcaggttatgataagccgtttaaaaccgttgcagaggggactaag
gcttatatggagtggttgaatagataa
DBGET
integrated database retrieval system
