Glaesserella parasuis KL0318: JT17_08970
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Entry
JT17_08970 CDS
T03312
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hpak
Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpak03021
]
JT17_08970
Transcription machinery [BR:
hpak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JT17_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
PDZ_2
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIK90805
LinkDB
All DBs
Position
complement(1788890..1791796)
Genome browser
AA seq
968 aa
AA seq
DB search
MSFVVGQRWISESENNLGLGIVTAVDNRTVTLSFPASDEQRVYAVAVAPLTRVQFQKGDR
VTSIDGWQLDIEDVVENQGVALYLGKRVDTQVESVLPEMQLDHKVSFSKPQDRLFSAQID
RSDRFALRYRALKHQQAQFQSELRGMRGIRASLIPHQLHIAKEVGQRLAPRVLLADEVGL
GKTIEAGMILQQQLFSGRVDRVLVLVPESLQHQWLVEMLRRFSLNFSLFDEERCADFTKK
DEDNNDISENPFETEALVIASIDWLSANPQRAKQVLDTDWDMLIVDEAHHLEWDEQNPSM
AYQFVAQLSKQISAVLLLTATPEQLGQESHFARLALLDPDRFYDYQAFVEEQKQYQPVAD
AVATLLNDKPLSAKEQESISELLAEEDVEPMFRIINSDASEEQSREVRQELISKLIDRHG
TSRVLFRNTRQGVKGFPHRIYNEIVLEMPTQYANALKVMCMMGGNKMEDLLYPERLFQRM
NPNAKWHEFDPRIEWLITFLKNHRDEKILVICKQADTAIQLEQVLREKEAIRSAVFHEKM
SIVERDKASAYFAQQEDGAQVLISSSIGSEGRNFQFARRLVLFNLPDNPDLLEQSIGRLD
RIGQKHDIEIYVPCFNHSTQLILAEWYHRGLNAFEETCPMGATLFREFNAELTAYLLNPE
RSEAFEAFVEQTHKRQQQLKVELEKGRDRLLELNSNGGETAQQLAQAIAEQDDNPQLVNF
ALNLFDVIGLEQEDLGEKSIVISPTGHMLVPDFPGLSEEGNTVTFDRELALMREDVLFLT
WDHPMIRNGIDLITSADIGKSAVSLLVNKNLLAGTLLLEAIYIVEAQAPKDLQLTRFLPP
TPMRILLDNKGNDMASQVSFAGLEKQLKPVNKQMANKIAKMARGDIEKLIAFSDEKVVPQ
AQSLIEQAKQNADHTLGAELHRLTSLQAVNKNIRADEIQALEQLREASLKHLDQANWRLD
SLRVIVSS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
ttgagctttgtagtcggacaacgttggattagtgagtcggaaaataacttaggattaggc
attgtcactgcagtggataaccgcactgtgaccctttcatttcctgcatcggacgaacaa
cgtgtgtacgctgttgccgttgcccctttaacccgtgtgcaattccaaaaaggcgatcgt
gttaccagtattgatggctggcagttagatattgaagatgtcgttgaaaatcaaggggtt
gcactctatttaggtaaacgtgtcgatactcaagtagagagcgttctgcctgaaatgcaa
ctcgatcataaagtgagttttagtaaaccgcaggatcgtctattctctgcccaaattgat
cgcagtgatcgtttcgccctgcgttatcgtgctttgaagcatcaacaagcccagtttcaa
tctgaactgcgtggaatgcgtggtattcgtgcaagcctaattccccatcaattacatatt
gccaaagaagtcgggcaacgtcttgctccccgtgtgttacttgcagatgaagtggggttg
ggtaaaaccattgaagcaggtatgattttgcaacaacagcttttctccggacgagtagat
cgtgtattggtgcttgtgccggaaagtttacagcatcaatggctggttgaaatgcttcgt
cgttttagcctgaatttttcgctgtttgatgaggaacgttgtgccgatttcactaagaaa
gatgaagataataacgacatcagtgaaaatccgtttgaaacggaagccttagtgattgcc
tctatcgattggttatcggcaaatccacagcgtgcaaaacaagtgcttgataccgattgg
gatatgttgattgttgatgaagctcaccatttggaatgggacgagcaaaatccaagtatg
gcatatcagtttgtcgcacagctctccaagcagatttcagcagtcttgttactcacggcg
acccctgagcaattaggacaagagagccattttgctcgtttagccttgctagatcctgac
cgtttctacgattatcaagcctttgtggaagagcaaaaacagtatcagccagtcgccgat
gcggtcgctaccttgcttaacgataagccgttaagtgccaaagagcaggaaagtatcagc
gaattgctggcggaagaagatgttgagccgatgttccgtattattaattcggatgctagc
gaagaacagagtcgggaagtccgccaagagttaattagtaagttaattgaccgacacgga
acaagccgtgtgctattccgcaatactcgccaaggcgtaaaaggcttcccacatcgtatt
tacaatgaaattgtgttggaaatgcctacacaatatgcaaatgctttgaaagtaatgtgt
atgatggggggaaataagatggaagatctgctctaccctgaacgcctattccaacgtatg
aacccaaatgcgaagtggcacgagtttgatccacgcattgagtggttaattacattcttg
aaaaatcatcgtgatgaaaaaattctggtgatttgtaagcaagcggataccgccattcag
ctagaacaagtgttgcgtgaaaaagaagctattcgctctgcggtgttccacgaaaaaatg
tcgattgtggagcgagataaagcctctgcatactttgctcaacaagaagatggcgcgcag
gttctgattagctcaagtatcggttcagaaggtcgaaacttccagtttgcacgccgttta
gtgctgtttaatttgcctgataatccagacttactcgagcagagtatcgggcgtttagac
cgtatcgggcaaaaacacgatattgaaatctatgtgccttgtttcaatcactccacccag
ttgatcttggcggaatggtatcatcgtggcttaaatgcctttgaagaaacttgtccgatg
ggggcaacgttatttagagaatttaatgcggaactcaccgcttacctactcaatcctgaa
cgtagcgaagccttcgaagcctttgtggaacaaacccataaacgccaacaacagcttaaa
gtggaattagaaaaagggcgagatcgtctgttagaactcaactcgaacggcggtgaaact
gctcaacaattagctcaagctattgctgaacaagacgacaatccgcagttggtcaatttt
gccttgaatttatttgatgtaattggcttagagcaggaagatttgggcgagaaaagcatt
gtgattagcccgacaggacatatgcttgtgcctgatttcccaggcttgtctgaagaaggc
aacaccgtgacttttgaccgtgaacttgccttaatgcgagaagatgtgttgttcttaacg
tgggatcacccgatgatccgcaacggtatcgatcttattacgtccgccgatattggtaag
agtgctgtttcattactcgttaataaaaacttgctggcaggcacgttactgcttgaagcg
atctatatcgtagaagcccaagcaccaaaagatttacagctcacccgtttcctaccgcca
acgcctatgcgtatcttgctggataacaaaggcaacgatatggcatcgcaggtgtcgttt
gcagggttggaaaaacagctcaagccggtcaataaacagatggcaaataaaattgcgaag
atggctcgtggtgatattgagaagctgattgcattcagcgatgaaaaagttgtaccacag
gcacaatccttaattgaacaggcaaaacagaatgcggatcacactttaggtgctgaatta
caccgcttgacatcactacaagcagtgaataaaaacattcgtgctgatgaaattcaagcc
ctagagcagttgcgagaagcatcactgaaacatctagaccaagcaaattggcgattggat
agcttgagggtgattgtgagtagttaa
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