KEGG   Glaesserella parasuis KL0318: JT17_08970
Entry
JT17_08970        CDS       T03312                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hpak  Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:hpak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpak03021]
    JT17_08970
Transcription machinery [BR:hpak03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     JT17_08970
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA SNF2-rel_dom Helicase_C ResIII DEAD Cas3-like_C_2 PDZ_2 Flavi_DEAD AAA_22
Other DBs
NCBI-ProteinID: AIK90805
LinkDB
Position
complement(1788890..1791796)
AA seq 968 aa
MSFVVGQRWISESENNLGLGIVTAVDNRTVTLSFPASDEQRVYAVAVAPLTRVQFQKGDR
VTSIDGWQLDIEDVVENQGVALYLGKRVDTQVESVLPEMQLDHKVSFSKPQDRLFSAQID
RSDRFALRYRALKHQQAQFQSELRGMRGIRASLIPHQLHIAKEVGQRLAPRVLLADEVGL
GKTIEAGMILQQQLFSGRVDRVLVLVPESLQHQWLVEMLRRFSLNFSLFDEERCADFTKK
DEDNNDISENPFETEALVIASIDWLSANPQRAKQVLDTDWDMLIVDEAHHLEWDEQNPSM
AYQFVAQLSKQISAVLLLTATPEQLGQESHFARLALLDPDRFYDYQAFVEEQKQYQPVAD
AVATLLNDKPLSAKEQESISELLAEEDVEPMFRIINSDASEEQSREVRQELISKLIDRHG
TSRVLFRNTRQGVKGFPHRIYNEIVLEMPTQYANALKVMCMMGGNKMEDLLYPERLFQRM
NPNAKWHEFDPRIEWLITFLKNHRDEKILVICKQADTAIQLEQVLREKEAIRSAVFHEKM
SIVERDKASAYFAQQEDGAQVLISSSIGSEGRNFQFARRLVLFNLPDNPDLLEQSIGRLD
RIGQKHDIEIYVPCFNHSTQLILAEWYHRGLNAFEETCPMGATLFREFNAELTAYLLNPE
RSEAFEAFVEQTHKRQQQLKVELEKGRDRLLELNSNGGETAQQLAQAIAEQDDNPQLVNF
ALNLFDVIGLEQEDLGEKSIVISPTGHMLVPDFPGLSEEGNTVTFDRELALMREDVLFLT
WDHPMIRNGIDLITSADIGKSAVSLLVNKNLLAGTLLLEAIYIVEAQAPKDLQLTRFLPP
TPMRILLDNKGNDMASQVSFAGLEKQLKPVNKQMANKIAKMARGDIEKLIAFSDEKVVPQ
AQSLIEQAKQNADHTLGAELHRLTSLQAVNKNIRADEIQALEQLREASLKHLDQANWRLD
SLRVIVSS
NT seq 2907 nt   +upstreamnt  +downstreamnt
ttgagctttgtagtcggacaacgttggattagtgagtcggaaaataacttaggattaggc
attgtcactgcagtggataaccgcactgtgaccctttcatttcctgcatcggacgaacaa
cgtgtgtacgctgttgccgttgcccctttaacccgtgtgcaattccaaaaaggcgatcgt
gttaccagtattgatggctggcagttagatattgaagatgtcgttgaaaatcaaggggtt
gcactctatttaggtaaacgtgtcgatactcaagtagagagcgttctgcctgaaatgcaa
ctcgatcataaagtgagttttagtaaaccgcaggatcgtctattctctgcccaaattgat
cgcagtgatcgtttcgccctgcgttatcgtgctttgaagcatcaacaagcccagtttcaa
tctgaactgcgtggaatgcgtggtattcgtgcaagcctaattccccatcaattacatatt
gccaaagaagtcgggcaacgtcttgctccccgtgtgttacttgcagatgaagtggggttg
ggtaaaaccattgaagcaggtatgattttgcaacaacagcttttctccggacgagtagat
cgtgtattggtgcttgtgccggaaagtttacagcatcaatggctggttgaaatgcttcgt
cgttttagcctgaatttttcgctgtttgatgaggaacgttgtgccgatttcactaagaaa
gatgaagataataacgacatcagtgaaaatccgtttgaaacggaagccttagtgattgcc
tctatcgattggttatcggcaaatccacagcgtgcaaaacaagtgcttgataccgattgg
gatatgttgattgttgatgaagctcaccatttggaatgggacgagcaaaatccaagtatg
gcatatcagtttgtcgcacagctctccaagcagatttcagcagtcttgttactcacggcg
acccctgagcaattaggacaagagagccattttgctcgtttagccttgctagatcctgac
cgtttctacgattatcaagcctttgtggaagagcaaaaacagtatcagccagtcgccgat
gcggtcgctaccttgcttaacgataagccgttaagtgccaaagagcaggaaagtatcagc
gaattgctggcggaagaagatgttgagccgatgttccgtattattaattcggatgctagc
gaagaacagagtcgggaagtccgccaagagttaattagtaagttaattgaccgacacgga
acaagccgtgtgctattccgcaatactcgccaaggcgtaaaaggcttcccacatcgtatt
tacaatgaaattgtgttggaaatgcctacacaatatgcaaatgctttgaaagtaatgtgt
atgatggggggaaataagatggaagatctgctctaccctgaacgcctattccaacgtatg
aacccaaatgcgaagtggcacgagtttgatccacgcattgagtggttaattacattcttg
aaaaatcatcgtgatgaaaaaattctggtgatttgtaagcaagcggataccgccattcag
ctagaacaagtgttgcgtgaaaaagaagctattcgctctgcggtgttccacgaaaaaatg
tcgattgtggagcgagataaagcctctgcatactttgctcaacaagaagatggcgcgcag
gttctgattagctcaagtatcggttcagaaggtcgaaacttccagtttgcacgccgttta
gtgctgtttaatttgcctgataatccagacttactcgagcagagtatcgggcgtttagac
cgtatcgggcaaaaacacgatattgaaatctatgtgccttgtttcaatcactccacccag
ttgatcttggcggaatggtatcatcgtggcttaaatgcctttgaagaaacttgtccgatg
ggggcaacgttatttagagaatttaatgcggaactcaccgcttacctactcaatcctgaa
cgtagcgaagccttcgaagcctttgtggaacaaacccataaacgccaacaacagcttaaa
gtggaattagaaaaagggcgagatcgtctgttagaactcaactcgaacggcggtgaaact
gctcaacaattagctcaagctattgctgaacaagacgacaatccgcagttggtcaatttt
gccttgaatttatttgatgtaattggcttagagcaggaagatttgggcgagaaaagcatt
gtgattagcccgacaggacatatgcttgtgcctgatttcccaggcttgtctgaagaaggc
aacaccgtgacttttgaccgtgaacttgccttaatgcgagaagatgtgttgttcttaacg
tgggatcacccgatgatccgcaacggtatcgatcttattacgtccgccgatattggtaag
agtgctgtttcattactcgttaataaaaacttgctggcaggcacgttactgcttgaagcg
atctatatcgtagaagcccaagcaccaaaagatttacagctcacccgtttcctaccgcca
acgcctatgcgtatcttgctggataacaaaggcaacgatatggcatcgcaggtgtcgttt
gcagggttggaaaaacagctcaagccggtcaataaacagatggcaaataaaattgcgaag
atggctcgtggtgatattgagaagctgattgcattcagcgatgaaaaagttgtaccacag
gcacaatccttaattgaacaggcaaaacagaatgcggatcacactttaggtgctgaatta
caccgcttgacatcactacaagcagtgaataaaaacattcgtgctgatgaaattcaagcc
ctagagcagttgcgagaagcatcactgaaacatctagaccaagcaaattggcgattggat
agcttgagggtgattgtgagtagttaa

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