Halorientalis pallida: ACOZ4N_13450
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Entry
ACOZ4N_13450 CDS
T12019
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hpal Halorientalis pallida
Pathway
hpal03022
Basal transcription factors
hpal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACOZ4N_13450
09124 Replication and repair
03420 Nucleotide excision repair
ACOZ4N_13450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpal03021
]
ACOZ4N_13450
03036 Chromosome and associated proteins [BR:
hpal03036
]
ACOZ4N_13450
03400 DNA repair and recombination proteins [BR:
hpal03400
]
ACOZ4N_13450
Enzymes [BR:
hpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ACOZ4N_13450
Transcription machinery [BR:
hpal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACOZ4N_13450
Chromosome and associated proteins [BR:
hpal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ACOZ4N_13450
DNA repair and recombination proteins [BR:
hpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACOZ4N_13450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
SLFN-g3_helicase
Zot
AAA_25
SecA_DEAD
nSTAND3
Asparaginase_C
AAA_34
nSTAND_NTPase5
PhoH
Motif
Other DBs
NCBI-ProteinID:
XRI32006
LinkDB
All DBs
Position
complement(2315070..2317271)
Genome browser
AA seq
733 aa
AA seq
DB search
MSSDGDEAGYVRFFPYDEPYDHQRDAMDRIYDALGEGSDVLFEGATGTGKTLAALVPALE
YAREEDKTVVITTNVHQQMRQFVQEARAITQQEPIRAVVFRGKGSMCHIDVGYEECQALR
DTTREIVEKERDLAELNERESTLLEDSQAGSEEAAEARGAVLEELDSVEAELEDLRENGN
TCDYYYHNLTGNTDDFYQWLFADVRDPDDIYEYAEMEGFCGYELLKEGMEGVDLVVCNYH
HLLDPGIREHFFRWLGRDPEDVITVFDEAHNVEDAARDHATRTLTETTLDSALDELAEQD
DPAAEAAQNVVRAFRSALIETYDDALGFGDRERIEENWEDLTIANEDGRDDLTINFLQAY
TGPGYDVDLQAALKFARALDEQYEEAYKNGETSTRQDCQTLQTIQFVMAWMDEGDTQGHY
PVVSVRRDEKSGDVYGRAELYRCIPQEVTRSLFDELHASVLMSATLRPFEVTEDVLGLDE
PETMAYGAQFPEERRRTYAVEAPALFSSERDDPAVQATVTDVLEDAIRFTPGNTLAFFPS
YSEAERYHDRVQADAEWFLDRPATSATELREAFTDSDEGVLFTSLWGTLTEGVSFDDGDA
RTVVVVGVPYPHLDDRMDAVQEAYDETFGDGGGEWMGTEDAGWAYAVEIPTVRKTRQALG
RVVRSPADFGARVLVDKRYTQVGERELGNYTVRETFPPEERAEMIDIDPAKLKFAMLNFY
GDMDAWDGAPPKP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcgacggagacgaggccggctacgtccgattcttcccctacgacgagccctac
gaccaccagcgcgacgcgatggatcgcatctacgacgcgctgggcgagggatcggacgtg
ctgttcgagggtgcgaccgggacgggcaagaccctggccgcgctggtgccggccctggag
tacgcccgggaggaagacaagacggtcgtcatcacgacgaacgtccaccagcagatgcgc
cagttcgttcaggaggcccgcgccatcacccagcaggaaccgatccgcgcggtcgtcttc
cgcggcaaggggtcgatgtgccacatcgacgtgggctacgaggagtgtcaggccctgcgg
gacacgacccgcgagatcgtcgagaaagagcgggacctcgctgaactgaacgagcgcgag
tcgacgctcctggaggacagtcaggccgggagcgaggaggccgccgaggcccgcggggcg
gtgctggaggaactcgattcggtcgaggcggaactcgaagacctgcgggagaacgggaac
acctgcgactactactatcacaatctcaccgggaatacggacgacttctaccagtggctg
ttcgcggacgtgcgcgaccccgacgacatctacgagtacgccgagatggagggcttctgc
gggtacgaactcctcaaggaggggatggagggcgtcgatctggtggtctgtaactaccac
cacctgctcgatccgggcatccgcgaacacttcttccggtggctcggccgggaccccgag
gacgtgatcacggtcttcgacgaggcccacaacgtcgaggacgcggcccgggaccacgcg
acccgcacgctcaccgagaccacgctggacagcgcgctggacgaactcgccgaacaggac
gaccccgcggccgaagccgcacagaacgtcgtccgagccttccgctcggcgctgatcgag
acctacgacgacgcgctgggctttggcgaccgcgaacggatcgaggagaactgggaggac
ctcaccatcgccaacgaggacggccgggacgatctgacgatcaacttcctgcaggcctac
accgggccgggctacgacgtggacctccaggccgcgctgaagttcgcccgggccttggac
gagcagtacgaggaggcctacaagaacggcgagaccagcacgcgacaggactgtcagacc
ctccaaactattcagttcgtgatggcctggatggacgagggcgacacgcagggccactat
ccggtcgtgagcgtccgccgggacgagaaaagcggcgacgtgtacggccgggcggaactc
taccggtgtatccctcaggaggtgacccgctcgctgttcgacgaactccacgccagtgtc
ctgatgagcgcgaccctgcgccccttcgaggtcaccgaggacgtgctggggctcgacgag
cccgagacgatggcctacggcgcgcagttccccgaggagcgccgccgcacctacgccgtc
gaagcgcccgcgctgttttcgagcgagcgcgacgaccccgcggtgcaggccaccgtgacg
gacgtgctggaggacgccatcaggttcacgccgggcaacacgctcgccttcttccccagc
tacagcgaggccgagcgctaccacgaccgggtgcaggccgacgccgagtggttcctggac
aggcccgcgaccagcgccacggaactccgcgaggcgttcaccgacagcgacgagggcgtc
ctctttacctcgctgtgggggaccctcacggagggggtgagcttcgacgacggcgacgcc
cggacggtcgtcgtcgtgggcgtgccctacccgcacctggacgaccggatggacgccgtc
caggaggcctacgacgagaccttcggcgacggcggcggggagtggatgggcacggaggac
gcgggctgggcctacgccgtcgagattccgaccgttcggaagacccggcaggccctgggg
cgggtggtgcgctcgccggcggacttcggggcgcgcgtgctggtggacaaacgctacacg
caggtcggcgaacgggaactgggcaactacacggtccgggagacgttcccgccggaggag
cgggcggagatgatcgacatcgatcccgcgaagctgaagttcgcgatgctgaacttctac
ggcgacatggacgcctgggacggggcgccgccgaagccgtag
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