Hafnia paralvei: AL518_00780
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Entry
AL518_00780 CDS
T05667
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpar03016
]
AL518_00780
Enzymes [BR:
hpar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AL518_00780
Transfer RNA biogenesis [BR:
hpar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL518_00780
Prokaryotic type
AL518_00780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AMH16708
UniProt:
A0A2A2MAS1
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All DBs
Position
complement(174662..175708)
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AA seq
348 aa
AA seq
DB search
MDFDALHYLHGRPQGTGVLKAFPEDFFVSEDLGFEPDGEGEHLLVRIRKEGCNTQFVADN
LARFAKIPQRSVSYAGLKDRHAVTEQWFCLHLPGKESPDLSQFILEGCQVVRSARHLRKL
RIGTLKGNTFRLVLRHITDRDDVEQRLQAIATEGAPNYFGAQRFGRGGNNLIQAAKWSRG
EIQVRERAKRSFYLSAARSAMFNQITNMRLAQDLQRQVMLGDAMQLTGRGSWFVANAEEL
DSLQQRTDGGELQITAALPGDNDLGTRDLAAQFEQQAIADYADLLALVKRERVESARRAM
LVKPQEMSWSWWDDATVEVEFALPAGSFATSIVRELFNQENPNADLAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtggattttgatgcacttcattatctgcatgggcgtcctcagggcaccggtgttctgaag
gctttcccagaggatttcttcgtctctgaagatttgggttttgaacccgatggcgaaggc
gaacacctcctagtgcgtattcgcaaggaaggctgcaatacacagttcgtcgccgataat
ctcgcacgtttcgcaaaaattccccaacgttcggtcagctacgctggattaaaagaccgt
catgcggtaaccgaacagtggttctgcctgcatctgccggggaaagagtcacccgacctc
agccagtttattttggaaggttgccaagtggttcgcagtgcgcgccatttgcgtaaactg
cgaattggtacgttgaaaggcaacactttccgcttggtactacgccatatcactgaccgc
gacgacgttgagcagcgcttgcaggcgattgcgacagaaggcgcgccaaactatttcggt
gcccagcgttttggccgtggtggtaataacctgattcaggcggccaagtggtcgcgtggt
gaaattcaggtcagagagcgagccaaacgcagtttctatctttcggctgcacgtagcgct
atgttcaatcagataacgaatatgcgtttggcgcaggacttgcaacgtcaggtgatgctg
ggcgatgccatgcaactgactgggcgcggcagttggtttgtcgccaatgccgaggagtta
gacagtttgcagcagcgaactgacggcggcgagctacagattacggcggcgttgccagga
gataacgatctcggtacgcgcgatttagcggcccaatttgagcagcaagctatcgcagac
tatgccgatttactggcattggttaagcgtgagcgggtggagtctgcgcgccgtgcaatg
ctggtgaaaccacaggagatgagctggtcttggtgggacgatgcgacggtagaagttgaa
ttcgcacttcctgctggcagttttgcgaccagtattgtgcgtgagttgttcaatcaggaa
aaccctaatgcggatcttgctgagtaa
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