Hafnia paralvei: AL518_01970
Help
Entry
AL518_01970 CDS
T05667
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpar03016
]
AL518_01970
Enzymes [BR:
hpar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL518_01970
Transfer RNA biogenesis [BR:
hpar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL518_01970
Prokaryotic type
AL518_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
AMH16915
UniProt:
A0A2A2MA21
LinkDB
All DBs
Position
complement(438704..439654)
Genome browser
AA seq
316 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKHQGLSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
ESTKFSQFLLDADKRYRVIARLGQRTNTSDADGEVVQERPVEFSQEQLDAALEQFRGDSQ
QVPSMYSALKYQGKPLYEYARQGIEVPREARDITVYELQFIRWENDELELEIHCSKGTYI
RTIIDDLGEVLGCGAHVIYLRRVQVSNYPSERMVTLEQLQQMVAAAEEAGIEPKTVLDPL
LLPMDTAASHLPEINLTDVVAAYVLQGQPVQVQGLPAEGMVRINVGEKRRFIGVGEVDDQ
GRLAPRRLVVEERVPE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacctcgccgtcgcggccgtgatattaacggcgttctgttattagacaagcac
caaggtctatcttcaaatgacgttttgcaaaaagtaaaacgcatctataacgccaacaag
gcaggacataccggtgcgctagatcctttagcgaccggtatgctgcctatttgtttgggc
gaatcgactaagttttcccaattcttgctggatgctgataaacggtatcgcgttattgct
cgtttagggcaaagaacgaacacctctgatgccgatggcgaagtggttcaggaacgtcct
gttgagttttcacaggaacaactggatgcggcgctggagcagttccgaggtgatagccag
caagtaccatcgatgtattctgcactgaaatatcagggtaagcccctatacgagtatgca
cgtcagggcattgaagtccctcgtgaagctcgtgatattaccgtttatgagttgcagttt
atccgttgggaaaatgatgagttagagttagagattcattgctctaaaggcacctatatc
cgaactattattgacgatttgggtgaggttttaggctgtggtgcgcacgttatctattta
cgtcgtgtgcaggtttctaactatccgtcagagcgcatggtgactttggaacaactacag
caaatggttgccgcagccgaagaggccggcattgaacctaaaacggttcttgacccgctg
ttgttgccgatggataccgcggcgtctcatctgccggaaataaatcttaccgatgttgtt
gccgcttatgttctacaaggacagccggtgcaggtgcaaggtttgcctgctgaaggtatg
gtgcgcatcaacgttggcgagaaacgtcgatttatcggcgttggcgaagtggatgaccaa
ggacgcttggcaccacgtcgcttagttgtagaagagcgcgttcctgagtaa
DBGET
integrated database retrieval system
