Hafnia paralvei: AL518_02325
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Entry
AL518_02325 CDS
T05667
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hpar
Hafnia paralvei
Pathway
hpar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AL518_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpar03019
]
AL518_02325
03009 Ribosome biogenesis [BR:
hpar03009
]
AL518_02325
Messenger RNA biogenesis [BR:
hpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL518_02325
Ribosome biogenesis [BR:
hpar03009
]
Eukaryotic type
Pre-60S particles
RNases
AL518_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMH16978
UniProt:
A0A2A2M9L6
LinkDB
All DBs
Position
complement(508271..508816)
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AA seq
181 aa
AA seq
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MSGSETNLIWIDLEMTGLNPEVDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDE
WNVRTHTGSGLVERVKASTFDEATAAQKTIEFLQQWVPAGVSPICGNSVGQDRRFLFRYM
PELEQYFHYRYLDVSTLKELARRWKPEILAGFKKQGTHQALDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagtgaaacgaatttaatctggatcgatttggaaatgacagggctaaaccca
gaagtcgatcgcatcattgaaatcgcaacgctagtgaccgatgccaatttgaatattctg
gccgaggggccggttattgcggtacatcaatcggatgaacagcttgcgttgatggatgaa
tggaacgttcgtactcacactggcagcggtctggtggaacgcgtcaaagccagtactttt
gatgaagcgactgctgcgcaaaaaaccattgagttcctgcagcagtgggttcctgcgggt
gtctctcccatttgtggtaatagtgttggccaagatcgtcgttttctattccgctacatg
cctgagttagaacagtactttcactatcgttatctcgacgtcagcaccttgaaagagctg
gcgcgccgctggaagccggaaatcctcgctggcttcaaaaagcagggaactcatcaggcg
ctggatgacattcgcgaatctgtcgctgaacttgcttattatcgtgagcattttattcag
ctttaa
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