Hafnia paralvei: AL518_04375
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Entry
AL518_04375 CDS
T05667
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL518_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_04375
Enzymes [BR:
hpar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AL518_04375
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AL518_04375
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL518_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AMH17324
UniProt:
A0A2A2M8B5
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All DBs
Position
complement(969149..969958)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGNSIEHLVVRQPKLRWPVSDELLRLSDKPVLSVQRRAKYLL
IELADGWIIVHLGMSGSVRILPADEPPQKHDHVDMILSSGMMLRYTDPRRFGAWLWCKDL
DSSNVLAHLGPEPLSDEFNGDYLFRKSRSKKTAVKAWLMDNKVVVGVGNIYASESLFTAR
ISPDRPAGDLTQADAEVLVATIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA
GEACRVCGEKILSGKHGQRTTFFCPRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagtcgaaactagccgtcgagggattgagccctatttagtcggt
aattcaattgaacatcttgtggtgcgccaacctaagcttcgttggccggtttctgatgag
ttacttcgattaagtgataagcctgtgcttagcgtgcagcgtcgtgctaagtatttgctg
attgaactagccgatggatggattattgttcatctcggtatgtctggtagcgtacgtatc
ctgcccgcagatgagcctccccaaaagcatgaccacgtcgatatgattctatcgagcggt
atgatgctgcgctataccgacccacgccgttttggcgcatggctttggtgcaaggattta
gattcatccaatgtccttgcccatctcggccctgagccgctcagcgatgagtttaacggt
gattatctgttccgtaagtcgcgtagtaagaaaaccgccgtgaaggcgtggctaatggat
aataaagtggttgtcggcgtagggaacatctacgccagtgaatcattatttactgcgcgt
atcagccccgatagacccgccggcgatttgactcaagcagatgccgaagtattagtcgcg
acgatcaaggcggtgctgctgcgttctattgagcagggtggtacaacgctaaaagacttt
ttgcagtcagatggaaaacctgggtattttgcgcaggaactacaagtttatggccgcgct
ggagaagcctgcagggtatgtggcgagaaaatattgagtggaaaacatgggcagcgtacg
acgttcttttgccctcgctgccagaaataa
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