Hafnia paralvei: AL518_06375
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Entry
AL518_06375 CDS
T05667
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL518_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpar03021
]
AL518_06375
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_06375
Enzymes [BR:
hpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL518_06375
Transcription machinery [BR:
hpar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL518_06375
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL518_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AMH17674
UniProt:
A0A2A2MCA6
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All DBs
Position
1412428..1413417
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQLSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKIQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEESIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaactgagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggtgtacaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgaaagttcaaggcaaagatgaagttattctt
accctgaataagtctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gttgaaatcgtcaagccgcagcatgtgatctgccatctgactgatgaaaatgcatcaatt
agcatgcgtatcaaaattcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgatcggccgtctgttagtcgatgcttgctacagccctgta
gagcgtattgcctacaatgttgaagctgctcgtgttgaacagcgtaccgacctggacaag
ctggttatcgagatggaaaccaatggtacgattgatccggaagaatcaatccgccgtgcg
gcaactatcttggctgaacaacttgaagctttcgttgacttacgtgatgtacgtcagccg
gaagttaaagaagagaagccggagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctagtacagcgtaccgaagttgagttgctgaaaacgccgaacttgggtaaaaaatctctt
actgagattaaagacgtgctggcttcacgtggtctgtctctgggcatgcgcctcgaaaac
tggccgccagctagcattgctgacgagtaa
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