KEGG   Hafnia paralvei: AL518_07065
Entry
AL518_07065       CDS       T05667                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
hpar  Hafnia paralvei
Pathway
hpar02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hpar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AL518_07065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hpar02022]
    AL518_07065
Two-component system [BR:hpar02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   AL518_07065
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 HTH_50 Mg_chelatase AAA AAA_5 AAA_2 MCM AAA_7 nSTAND3 AAA_22 AAA_16 AAA_3 B12-binding Parvo_NS1 OKR_DC_1_N FleQ DUF815 HTH_30 IstB_IS21 PDE8A_N ATPase IDEAL
Other DBs
NCBI-ProteinID: AMH17793
LinkDB
Position
1580431..1581825
AA seq 464 aa
MSQPCRILIVDDEKNVLRMLNTVFSQEGNQVFCADNGQDALAIFEQERPDVVLMDIRMPT
MNGLEALQRMREKWLDTPIILMTAYAAVETAVEALRLGAFDYVIKPFELDELKLLINRAL
QLRNMKQEINILHRELSDSYHCDKILTNNPKMMELCRTIAKVAQSHANVLVTGESGTGKE
LIAKAIHYNSPRSKQPFIKVNCGALPESLLESELFGHEKGAFTGAQMQRQGLFERAHQGT
LLLDEIGEMPLNLQVKLLRVLQEQEFERVGGSQTIKIDVRIVAATNRDLSDMIEQGEFRR
DLYYRLNVMHLYSLPLRERPEDILLLARYFLQKFSAENNKDIIGFDVSAIRMLENYPWLG
NVRELANAVEHAVIMSTGYMIFVDDLPIGFQQEMIQDTAVVENNPKMTELLDKPIKLKES
LKQYEKEIIERVLAIYQGNRIDTAKALGISRRALMYKLQEYSIN
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgagccagccttgccgtattcttatcgttgatgatgaaaaaaacgttctcaggatgttg
aacacggttttttcacaggaaggtaatcaggttttctgtgcagataatggtcaggatgca
ctggctatttttgaacaagaaaggcctgatgtcgtgttgatggatattcgcatgccaacg
atgaatggccttgaagctttgcagcgcatgcgagagaaatggctggatacgccgattatt
ttaatgacggcttatgccgccgttgaaacggccgtggaggcattacgcctaggcgctttc
gattatgtgatcaaaccgtttgagctggatgagttaaaactcttaattaatcgtgcgctg
caattacgcaacatgaagcaagaaatcaatattctgcaccgtgaactgtcagatagttat
cactgtgacaaaattctgacgaataaccctaaaatgatggagttgtgtagaaccattgcc
aaagtggctcagagccacgccaatgtgttggtcactggcgaaagtggtactggcaaagag
cttatcgcgaaggcgattcactataatagcccgcgttctaaacaaccgtttattaaggtt
aactgcggcgcattgcccgaatcgttgctagagagcgaattgtttggccatgagaagggc
gcatttaccggcgcgcaaatgcaacggcaggggctatttgagcgtgcccatcagggaaca
ctgctgctggatgaaattggtgagatgccacttaatttgcaggtgaagctgttgcgcgta
ttacaagaacaggagtttgagcgcgttggtggcagccaaactatcaaaatcgatgtgcgc
attgtagcggctaccaatcgtgatttgagcgacatgatcgagcaaggtgagtttaggcgc
gatctttattatcgtcttaatgtgatgcacttatattcattgcctctacgtgaaagaccg
gaagatattttattactggcgcgctattttttgcagaaatttagtgcggaaaataataaa
gatattatcggatttgacgtcagtgctattcgtatgcttgaaaattatccatggttaggc
aacgtgcgtgagcttgctaatgccgttgaacacgctgtgattatgagtacggggtatatg
attttcgttgacgatctacccatcggatttcagcaggaaatgattcaagacacagctgta
gtggaaaataatccgaaaatgacagagctgctcgataaaccaataaaattaaaagagagc
ttaaaacagtatgaaaaagagattattgagcgcgtgctggcaatatatcagggcaaccgt
atcgatacggctaaagcgctgggaattagtcgccgagctttaatgtataagctccaggaa
tacagtattaattag

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