Hafnia paralvei: AL518_07460
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Entry
AL518_07460 CDS
T05667
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpar03009
]
AL518_07460
Enzymes [BR:
hpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AL518_07460
Ribosome biogenesis [BR:
hpar03009
]
Prokaryotic type
rRNA helicases
AL518_07460
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMH17863
LinkDB
All DBs
Position
1678307..1679686
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AA seq
459 aa
AA seq
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MTQSFASLSLPAAQLENLAELGYASMTPVQAAALPAILEGRDVRAQAKTGSGKTAAFGIG
LLQQIDVTQFTTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPISHQLDSLV
HAPHIVVGTPGRIQEHLRKKSVSLDAMKVLVLDEADRMLDMGFADAIDDVISYTPTARQT
LLFSATYPQGIERISARVQREPVTIETGDVSALPDIEQQFYETSRGEKLLLLQALLSNLQ
PASCVVFCNTKRDCQDVYDALSGQNISVLALHGDLEQRERDQVLVRFSNRSCRVLVATDV
AARGLDIKELEMVVNYELSFDPEVHVHRIGRTARAGQKGLAVSFVAPSEMVRAHALEDYI
GLKPNWLSADKMMASPMKPLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGKI
DMFPIHAYVAIRKAAAKKAYKQLQEGKIKGKSCKVRIYK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaatcctttgcttccctgtcgctgccagcagcgcagcttgaaaacctcgctgaa
cttggttatgcctccatgacgcccgtgcaggccgctgcattacccgccattttggaaggc
cgcgatgttcgggcgcaggccaaaaccggtagcggtaaaaccgccgcttttggtattggt
ctgctccagcagattgacgtcacgcagtttacgactcaggcgctggtgctttgtccaact
cgtgagctggccgatcaggttagcaaagagctgcgccgtttagcccgtttcactcagaac
atcaaaattctcaccctctgcggcgggcagccaatcagtcatcagttggattcgttagtc
catgcaccacacattgtggtgggtacgcctggacgtatccaagagcatctgcgcaagaaa
agcgtcagtctggatgcaatgaaggtgctggtgttggatgaagctgatcgcatgctagat
atggggttcgcggacgctatcgatgatgttatcagctatacgccaaccgcgcgtcagacg
ctgctgttctctgcgacctatccgcagggcattgagcgcattagcgcccgcgttcagcgt
gagcccgtcacgattgaaacgggtgacgtttctgcattgcccgatattgaacagcagttt
tatgaaacgtcacgcggtgagaaactgcttttgctacaggcattacttagcaatctgcaa
cccgcctcatgcgtggtgttctgtaatacgaagcgtgattgccaagacgtttatgacgcg
ttgtctgggcaaaatatcagcgtattagcactgcacggcgatttagagcagcgtgaacgc
gatcaggttttggtgcgattctctaaccgtagctgccgtgtgctggtcgcgactgacgtc
gctgcgcgcggtttggatatcaaagagctagaaatggttgtgaactacgagctgtccttc
gatccggaagttcacgttcatcgtattggccgtactgcgcgagcgggccagaaaggtttg
gccgttagcttcgttgcgccatctgaaatggttcgggcacatgcgttggaagattatatt
ggcctgaagccgaactggttgtctgccgataaaatgatggcttcgccgatgaaacctctt
gaggcggaaatggtaacgctgtgcatcgacggtggccgcaaggcgaaaatccgtccgggc
gatattttaggcgcacttaccggtgatgcgggattaaccgctgccgatgtgggtaaaatt
gatatgttcccgatccacgcttatgtcgccattcgcaaagcggcggccaaaaaagcctat
aagcagctgcaagaaggtaaaattaaaggcaaaagctgcaaggttaggatttataaataa
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