Hafnia paralvei: AL518_08680
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Entry
AL518_08680 CDS
T05667
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL518_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpar03019
]
AL518_08680
Enzymes [BR:
hpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AL518_08680
Messenger RNA biogenesis [BR:
hpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AL518_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AMH18085
LinkDB
All DBs
Position
complement(1963139..1964611)
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AA seq
490 aa
AA seq
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MYHVAGAKRSLNDSEHTTNKTLSRCTIFTRVANFCRKVLSREAESAQAEESRSMTVIPRD
QHNISRQQISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKQPKDFDITTSATPEQVRKL
FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEHAGDGKNISQQAQNGMLLRDNVYGNIE
EDAQRRDFTINSLYYSISDFTVRDYTGGLRDLQEGRIRLIGDPETRYREDPVRMLRAVRF
AAKLDMTICPQTAEPIPRLAALLHEIPSARLFEESLKLLQSGYGFATYKLLCEYQLFQPL
FPVISRHFTPNGDSPLERIINQVLKNTDHRLQNSMRVNPAFLFAAMLWYPLIELAQKIND
ESGLTYYDAFALAMNDVLDEQCRTLAIPKRITALVRDIWSLQLRLSRRQGKRAHKLMEQP
KFRAAFDLLALRAQAENSNELQRLTQWWDEFQKAPLTRQKTMANELGDDGARRRPRRPRR
RAPRREGNGE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacgttgcgggcgctaaacgcagcttgaatgattcagagcatacgactaacaag
acactatcgaggtgcaccatttttacccgagtcgccaacttttgccgtaaggttttaagc
cgagaggcggagagcgcacaagcggaggagtcacgttcaatgacggtgatcccgcgcgat
caacataacatttcgcgccaacaaatcagtgagaacgccctcaaggttctctatcgcctg
aacaaatcaggatacgaagcgtatctggttggtggtggcgtgcgcgatctgctgctcggt
aaacagcctaaagattttgacatcaccacgagcgcaacgccggagcaagtacgtaaattg
ttccgcaactgtcgcttagttggccgccgtttccgtttggcccacgtgatgtttggccca
gaaattatcgaagttgccactttccgtggtcaccatgaacatgctggtgatggcaaaaat
atctctcagcaagcgcaaaacggcatgctgctacgcgacaacgtgtacggcaatatcgaa
gaagatgcccagcgtcgcgatttcaccatcaatagcctgtattacagcatttcagatttt
acggttcgtgattacaccggcggcctgcgtgatttgcaggaaggtcgaattcgcctgata
ggcgatccagaaacgcgctaccgtgaagatccggtacgaatgctgcgtgcggtacgcttt
gcggccaagctggatatgactatctgcccgcaaacggcggagcctattccacgtttagcg
gcgctgctgcatgagatcccatcggctcgcctgtttgaagagtcgctgaaactactacag
tctggctatggttttgccacttataagttgctgtgcgaataccagctattccagccgttg
ttccccgtcatttctcgccacttcacacctaatggcgatagcccgctggaacgaatcatc
aatcaggtgctgaaaaacaccgatcatcgtttgcaaaacagcatgcgagtgaatcctgca
tttctgttcgcagctatgctgtggtatccgctgattgagctggcacaaaaaattaatgat
gaaagtggattgacctactacgacgctttcgctctggcgatgaatgatgttttggacgag
caatgtcgcactctcgcgattccaaagcgtatcaccgcattagttcgtgatatctggtct
ctgcaactgcgtctgtctcgccgccaaggaaaacgtgcgcataagctgatggaacaacct
aagttccgtgccgcttttgatctgctggcgctgcgtgctcaggctgagaacagcaatgag
ctacagcgtttgactcagtggtgggatgaattccagaaagctccgctgacgcgtcagaaa
acgatggccaacgaacttggtgatgatggtgctcgccgtcgcccacgtcgtcctcgccgc
cgcgcaccgcgccgtgaaggcaacggcgaatga
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