Hafnia paralvei: AL518_08805
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Entry
AL518_08805 CDS
T05667
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL518_08805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_08805
Enzymes [BR:
hpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AL518_08805
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL518_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMH18108
LinkDB
All DBs
Position
1991950..1995321
Genome browser
AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKQLIAALIEGQPLQNPFEQEVILVQSPGMAQWLQMELAKQFGIAANI
EFPLPATFIWNLFTQVMPGIPKESAFSKDAMTWKLMWLLPKMLEQEAFLPLARYLSDDED
RRKHFQLAARVADLYDQYLVYRPEWLQIWERCEYVDGLDESQQWQAPLWVALKEYTAELK
QPEWHRANLYEKFIQTLEQATACPQGLPKRVFICGIAALPPIYLDALKALGKHIDVHLMF
TNPCRYYWGDIQDYAFLAKLQSRKRRHHIQRQQEISLFRDPQSASELFKPDGEQDLSNPL
LASWGKLGRDHMYLLAQREPQEVHAFVDLTEDTLLTRIQRDLLELEDHSQIVDSPERLNS
SSGKRLLERGDRSISVNLCHSPQREVEVLHDRLLDLFAEDPSLTPRDVIVMVADIDSYTP
FIQAVFGNAPRERYLPFAISDRSARQAHPVIQAFLTLLELPNSRFTSEHVLTLLEVPALA
AHFGISEEGLRRLRHWVDESGIRWGLDDDNVRALDLPATGQHTWQFGLTRMLLGYAMDSR
CGDWNGVLPYDESSGLIAELAGQLADLLMRLSVWRTRLRGEYRVQEWQPLCREILNEFFE
QDSETEAVQALIEQQWLKVIGYGISAEYPQAIPISILRDELTSRLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGIYPRTIAPLGFDLMANKVQRGDRSRRDDDRYLFLEAL
LSAQERLYISYIGRSIQDNAPRYPSVLVSELMEYIAQSHHLPGDETLDVDSSAKRVMEYL
QIQHPRVPFASENYAVGSESQSYASEWLPAARRSGEAHQEFALALPLEEFSTITLDELIR
FYRHPVRAFFQMRLGVNFVLEETELPDEEPFTLDNLSRYQLNSQLLNQLIDGDEAETLFR
RFRSAGGLPYGAFGELYWEKQQEEMSEVAAKVREHRQAGHSIEIDYMLGGVRLTGWLQQV
QDNGLVRWRPAILGAVDGMALWIEHLFYCFSGGEGESRCFGRQNSAWHFAPLSPKDAEKA
LLPLIEGYRQGRSCPLLLLPKTGWAWLSACFDKDSGMVDWDEQTQSKAQMKLLLAWQGDQ
RVIGEGSDPYIQRVMRTMDEKKMREVQQWAEQYYLPIARNNLD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgtttatcactcgaaccaattggatttgctcaaacagctgatcgcggcgctg
attgaaggacaacctttgcagaatccttttgagcaggaagtgattttggtacaaagtccc
ggtatggcgcagtggcttcaaatggagttggcgaaacagtttggtattgctgccaatatc
gaattccctctgccggcgacattcatctggaatttgtttacacaggtcatgcctggcatt
cccaaagagagtgccttcagtaaagacgccatgacgtggaaactgatgtggctattgccg
aaaatgctggagcaagaagcgtttttgccgctggcgcgttatctctctgacgatgaggat
cgccgcaaacatttccagcttgcggcgcgtgtcgctgacctttacgaccagtacttagtg
taccgtcctgagtggctacagatttgggagcgctgtgagtatgtcgacggtctggatgag
tcgcagcaatggcaggctccactgtgggtggcgttgaaagaatataccgccgagctaaaa
caacctgaatggcaccgcgctaatttgtacgaaaagtttatacaaaccttagagcaggca
acagcgtgtccacaagggctgcctaaacgtgttttcatttgtgggattgccgcgcttcca
ccgatttatctcgatgctttaaaggcattaggtaagcatattgatgtgcacctgatgttt
actaacccatgtcgttattattggggtgatattcaagactatgcatttcttgccaagcta
cagagccggaaacgtcgtcaccatattcaacgtcaacaggaaattagcctcttccgcgat
cctcagagcgcgtctgaactatttaaaccagacggtgaacaagacctcagtaacccactg
cttgcgtcttggggaaagctagggcgcgatcatatgtatctgttggcgcagcgcgagccg
caggaagtacatgcctttgtcgatttaacggaagatacacttctgacgcgcattcaacgc
gatttgcttgagctggaagaccacagccagatagtcgacagcccagagcgcctaaacagc
agcagtggaaaacggttgttagagcggggagatcgcagtattagcgtaaacctttgccac
agccctcagcgtgaagttgaagttttacatgacagactgctggatttatttgcggaagat
ccttctctgactccgcgtgatgtcattgtgatggttgctgacatcgacagctatacgcca
tttattcaggccgtgtttggtaatgcgccgcgtgagcgctatctgccttttgccatttct
gaccgcagtgcgcgtcaggcacatccagtaatacaggctttcttgacgttgcttgagcta
cctaacagccgctttacctctgagcatgttttaacgttgctggaagtacctgctctggcc
gcacattttggcattagcgaagagggattgcgtcgtttacgccattgggttgatgagtct
gggatccgctgggggctagacgatgacaatgtgcgtgcgctggatctgcccgcgacgggg
caacatacgtggcagtttggcttaacccgcatgttgctcggttatgcaatggatagtcgc
tgtggcgattggaatggggtgctaccttatgatgaatccagcgggcttattgctgagtta
gctggtcaactggctgatttattgatgaggctcagcgtgtggcgtacgcggcttcgcggt
gaatatcgtgttcaggagtggcagccgctatgccgtgaaatccttaacgaattctttgag
caagatagcgaaaccgaggcggttcaagctctcattgagcagcaatggttaaaggtgatt
ggttatggcattagcgcggaatatccccaggcgatacctatctcaattttgcgcgatgaa
ttgacatcacgcttagacaatgagcgaattagccaacgttttttggctgggccgataaac
ttctgcactcttatgccaatgcgctccattcccttcaaagtggtgtgtctgctaggcatg
aatgatggcatttatccgcgcactattgcgccattaggtttcgatctgatggcgaacaaa
gtacaacgcggcgatagaagccgccgagacgacgaccgctatctgtttcttgaagcgctg
ctgtcagcacaagagcgtctttatatcagctacataggacgctctatacaggataatgcg
ccgcgttacccgtcggtattggtcagtgagctgatggaatatattgctcaaagccaccat
ttaccgggagacgagacgctggacgtcgatagcagcgcgaagcgagtaatggaatatttg
caaattcagcacccgcgagtgccttttgcctcggaaaactatgccgtgggaagtgaaagc
caaagttatgcgtctgagtggctgcctgccgctcggcgtagcggtgaggcacatcaggag
tttgctttagcgttgccgctagaagagttttcgacgattacgctagatgagctgattcgt
ttttaccgtcatccggtacgcgcctttttccagatgcgccttggggtcaacttcgtttta
gaagaaaccgagctaccggatgaagaaccgttcacgctggataatctcagccgctatcag
ctcaatagtcagctcttgaatcagttgattgatggcgatgaggctgagacgttgttccgc
cgttttcgctctgcgggtggcttgccgtacggtgcctttggtgaactctattgggaaaaa
cagcaggaagaaatgtcggaggttgccgcaaaggtaagagagcatcgccaagcggggcac
agcattgagattgattatatgctgggtggcgtgcggttaaccggttggttacagcaggta
caagataacggcttggtacgttggcggccagcaatccttggggcggtagatggtatggct
ttgtggattgagcatttgttttattgctttagcggtggtgaaggtgagagtcggtgtttt
ggtcgccaaaactcggcgtggcattttgcgcctttatcacccaaagacgctgaaaaagcg
ctattaccactgattgaaggttatcgccaaggtcgcagttgtcctcttttactgctgcct
aaaaccggttgggcgtggctgagcgcctgctttgataaggattccggaatggtcgattgg
gatgagcaaacccaatcgaaggcacaaatgaaactattgttggcatggcagggtgaccag
cgtgttataggcgagggctctgatccttacatccagcgagtaatgcgcactatggatgag
aaaaaaatgcgcgaggttcagcaatgggcggagcagtattatttgccgatcgcgcggaat
aatctggattga
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