Hafnia paralvei: AL518_09025
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Entry
AL518_09025 CDS
T05667
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03030
DNA replication
hpar03430
Mismatch repair
hpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL518_09025
03430 Mismatch repair
AL518_09025
03440 Homologous recombination
AL518_09025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpar03032
]
AL518_09025
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_09025
Enzymes [BR:
hpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL518_09025
DNA replication proteins [BR:
hpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL518_09025
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL518_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AMH18144
UniProt:
A0A2A2ME94
LinkDB
All DBs
Position
2043904..2047386
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKVGPLVKKVAALGMPAFAITDHTNMCGLVKFYGSAHGA
GIKPIIGADVFVKSELLGDELSHLTILAANNTGYQNLTLLISHAYQRGYGADGPVIDRDW
LVEYREGLILLSGGRQGDVGKMLLRGNQQLAHECVDFYQQYFADSYYLELIRTGRPDEES
YLHFAVALAEERELPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPKNYSAQQYM
RSEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDFLVAKSKEGL
EERLEFLFPDPEVRAKRRPEYDERLDVELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPEPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDSEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKAGEDPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAERMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIDARNEGGHFKELFDLCARTDTKKLNRRMLEKLIMSGAFDRLGPHRAALMN
SLNDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEKSYSSVAPWPAQVVLDGERETLGLY
LTGHPITQYLKEIERYAGGMRLKDMHPTDRGKMTTAVGLVVAARVMTTKRGNRIGVCTLD
DRSGRLEVMLFTDALDKYQHLLEKDRILIASGQVSFDDFSGGLKMIARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRDSLEPHRSGTIPVHLYYQRDNARAKLRFGAAWRVTPTD
RLLVDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcatacatctgcgcgtacatagtgactattccatgattgatggg
ctggcgaaagtcggcccattggttaagaaagttgctgcgctaggtatgccagcctttgcg
attactgaccacactaacatgtgtgggttagtcaaattttatggttcggcgcacggcgcg
ggtattaaaccgatcatcggcgcagatgtatttgtcaaaagcgaattgttaggggatgag
ctttctcatctcactattctggcagccaacaataccggctaccaaaatcttactctattg
atttcgcacgcctatcaacgtgggtacggtgccgatggaccagtcattgaccgtgattgg
ctggttgaataccgcgaaggtctcatcttgctctccggtggtcgccaaggcgacgtcggt
aaaatgttgctgcgtggtaatcagcaactggcgcatgagtgcgtcgatttttatcagcag
tattttgccgatagttattatctcgaactgatccggaccggccgtccagatgaagagagc
tatctccattttgctgtagcactggctgaggagcgcgagctgccggtagtggcaactaac
gacgtacgcttcttggagcccggtgattttgatgcacatgaaattcgcgtggcgattcat
gacggttttaccttggacgatcctaaacggcctaaaaactacagcgctcagcaatatatg
cgcagtgaagaggaaatgtgtgagctatttgctgacattcctgaagcactggaaaatagc
gtagaaattgccaagcgctgtaatgtcacgatccgtttaggtgagtatttcctaccgcag
ttcccaaccggcgaaatgtcgacggaagacttcttggttgccaaatccaaagaaggtttg
gaagagcgtctggagttcttgttccccgatccggaagtacgcgctaagcgacgccctgag
tatgatgaacgtctggacgttgagctaaaagttatcaaccagatgggattccccggctac
ttcctgatcgtcatggagtttatccagtggtcgaaagataacggtgttccggttgggccc
ggtcgtggttctggtgcgggttctttggtggcctatgcgctgaaaattaccgatttggat
ccgctggaatttgacctgctgttcgaacgattcctgaaccctgaacgtgtatccatgccc
gactttgacgtcgacttctgcatggagaaacgagatcgggttatcgatcacgtggcggaa
atgtatggccgtgacgcggtatcgcagattattaccttcggaaccatggcggcgaaagcg
gtaatccgcgacgttggtcgtgtgctcgggcatccatacggttttgtcgatcgtatatcg
aaattggtgccgccagagccgggaatgacgttggcgaaggcttttgaagccgaaccccag
ttgcctgaaatctacgaggctgatgaagaggttcgcgcgctgatcgatatggcgcgtaag
ctggaaggggtaacacgtaacgccggtaaacatgctggtggtgtggttatctcgccaacc
aaaatcaccgattttgcgccgttatactgtgactctgaaggtaatcatccggttacccag
tttgacaagagcgacgtagagtacgctgggctagtcaagtttgacttcttaggactgcgc
acgctgacgattatcgactgggcgttggagatgattaacgcccgtcgcgctaaagcgggt
gaagatcctatcgatatcgcggctatcccgctcgacgataaaaaaagtttcgacatgctg
caacgctcggagaccacggcggtattccagcttgaatcgcgcggcatgaaagatttgatt
aaacgcctgaagcctgactgcttcgaagatatgatcgcattggtggcgctgttccgccca
ggacctttacagtcagggatggttgataactttattgaccgtaagcacgggcgcgaagag
gtttcttatcctgatgttcagtggcagcatgagtcgctgaaaccggtactggagccgacc
tacggcattattctgtaccaagaacaggtcatgcagatcgcacaggtgctgtctggctat
acgctgggcggagcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gcgaagcagcgctcggtgtttaaagagggcgcagagcggatggggatcgacggtgagctg
tcgatgaaaatctttgacttggtagaaaaattcgccggttatggattcaacaaatctcac
tccgcagcctatgccttggtttcataccaaacgttatggcttaaagcacattatcctgct
gagtttatggcagcggtaatgaccgccgatatggataacacggaaaaagttgttggcttg
gtggacgaatgctggcgaatggggttgaaggtgcttccgccggatatcaatagtggccag
tatcacttccatgtgaacgatgatggtgagattgtttacggtatcggtgcaattaaaggc
gtaggtgaagggccgattgaggcgatcatcgacgcacgtaacgaaggcggacatttcaaa
gagttatttgatttgtgtgccagaacagacaccaaaaagctaaaccggcgtatgctggag
aagctgattatgtctggcgcatttgatcgcttggggccgcatcgcgcggcgctgatgaac
tcgcttaatgacgcattaaaagccgctgaccaacacgctaaagctgaggctattggtcag
gtggatatgttcggtgtgctggctgaggcacctgaacaggttgagaaatcctatagcagc
gtcgcgccatggcctgctcaggtggtattggatggcgagcgtgaaacgttaggtttgtac
ctaaccggacaccccatcacccaataccttaaggagatagagcgctacgccggtggcatg
cgcctaaaagatatgcatccgacggatcggggcaaaatgaccactgcggttggtctcgtg
gtagctgcacgagtgatgaccaccaagcggggtaatcgtattggcgtctgcacactggat
gaccgttccggtcgtctcgaagtgatgctgtttaccgatgcgttagataaataccaacat
ttgctggaaaaagaccgtatcctgattgccagcggacaggtcagctttgatgactttagc
ggtgggcttaaaatgatcgcccgcgagctaatggacatcagtgaagcacgcgaaaaatat
gcgcgtgggcttgctatctcgctgactgacaggcaaattgatgaccagcttttaaaccgt
ctccgcgactcgttggaaccacatcggtcggggacgattccagtgcatttatactatcaa
cgtgataatgcacgcgctaagttaagatttggcgcggcctggcgggtaacgccgacagat
cgcctgctagttgacctgcgtactctggtgggtaacgaacaggtcgaactggaatttgac
taa
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