Hafnia paralvei: AL518_10235
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Entry
AL518_10235 CDS
T05667
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03030
DNA replication
hpar03430
Mismatch repair
hpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL518_10235
03430 Mismatch repair
AL518_10235
03440 Homologous recombination
AL518_10235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpar03032
]
AL518_10235
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_10235
Enzymes [BR:
hpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL518_10235
DNA replication proteins [BR:
hpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL518_10235
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL518_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_2
AAA_14
ResIII
RCF1-5-like_lid
TsaE
Mg_chelatase
AAA_lid_RFC1
Adeno_E1B_55K_N
nSTAND3
AAA_assoc_2
PIF1
TPR_DNAAF5
Motif
Other DBs
NCBI-ProteinID:
AMH18361
LinkDB
All DBs
Position
2308226..2310229
Genome browser
AA seq
667 aa
AA seq
DB search
MSYQVLARKWRPQTFSDVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITSTPCGVCDNCREIEQGRFVDLLEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRTQLEKISTAEGFTAEPRALQLLARAAEGSMRDALSLTDQAIAMGLGQITAETVGQM
LGTLDDEQPLAIIEALVDADGEKVMALVEQAASRGVDWENLLIETLTLLHRIAMLQLLPN
ALDSHYISVEQRLRELARTLPPSDLQLFYQVLLTGRKELTYAPDRRMGVEMTLLRALAFH
PKEVIAEPVAAPQTALPSMPVHSTASAAPSSYMPTQHSALDMQGMPPAGQFQPQEAAPVR
STAKPTGLSDATAQLLQARSQLRQKTGGGTDPKKNEPAAPVTARPASSALERLASVTERS
QQRQAAAAETKPLKKEAYRWKAQTKAVEAKREEIATPKALRTALEYEKTPELAAKLAEES
LTRDEWAAELNQLRLPKLVQQLALNAFREPAEEGKVLLHLRSSQRHLNSASAQQTLSQAL
SEHYGRPVELTIIEDDNPERLTPLEWRQTIYEEKLAQARQSIAADSNIQTLRRFFDAELD
EESIRPV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtacttgcccgtaagtggcgtccacaaacgttttctgacgtcgtgggt
caggaacatgttctgaccgcgctagccaacggcctttccttagggcgtattcaccacgcc
tatctgttttccggtactcgcggcgtgggtaaaaccagcattgcacgcctgttggcgaaa
ggactgaactgcgagacgggcatcacttctacgccgtgtggtgtatgcgataactgccgt
gaaatcgagcaaggacgttttgtcgacctgctagaaattgatgcggcgtcgcgtactaaa
gttgaagatacgcgtgacctgctggacaacgtacagtacgcaccggcgcgtggtcgcttc
aaggtctatctgattgacgaagtgcacatgctctcccgccacagcttcaatgcgctgttg
aaaacgttggaagagccgcctccgcacgtcaaattcctgctggctaccaccgatccgcaa
aagctgccggtgacgattttatctcgatgcttacagttccatcttaaagcattagacgtt
gagcaaattcgcacccagttggaaaagatctctacggcggaaggattcaccgccgagcca
cgcgctctgcaactgttagcgcgtgctgccgaaggcagtatgcgtgatgcgcttagcctg
accgatcaggcgatcgcgatgggattaggccaaatcactgctgaaaccgtagggcagatg
cttggcacactggatgatgagcagcctctggcgatcattgaagcgctggtggatgccgat
ggcgaaaaggtgatggcgctggttgagcaagctgcttcgcgcggcgtggattgggaaaat
ctactgattgaaaccctgacgttgttgcaccgtattgcgatgttgcaactgctgccaaat
gcgttggatagtcactatatttccgttgagcagcgtttacgcgagctcgcacgtacgctg
ccaccttcagatctgcagttgttctatcaggtgttgctgaccggtcgcaaagaattgacc
tatgcgccagaccgacgcatgggggtggaaatgacgttgctgcgcgcgttggcttttcac
ccaaaagaggtgattgctgagccagtggcggcacctcagaccgcactgccaagtatgcct
gtgcacagtaccgcatcggcggcgccatctagctatatgccgacacagcattcggcactc
gatatgcaaggcatgccgcctgcggggcaattccagcctcaagaagcagcaccggtgcgt
tcaacggcaaaacctactggtttatctgacgcaacggctcagctgttacaggctagaagt
cagctacgtcaaaaaacgggtgggggtactgatccaaaaaagaatgagccggcagcgcca
gtcaccgcgcggccggcaagctcagcactggagcgtttggcatcagtgacggagcgtagc
cagcagcgtcaggctgcggcagcagaaaccaaaccgctaaaaaaagaggcctatcgctgg
aaagcacagacgaaagcggtagaggccaagcgcgaggagatcgccacgccgaaagcgttg
cggaccgcgctggaatatgaaaaaacgcctgagctggcggcaaagctggccgaggagtcg
ttgactcgtgatgaatgggcggcggagttgaatcagctgcgtttacctaagctggttcaa
cagttggcgttgaatgcgtttcgtgagccagcagaagagggcaaggtgcttctgcattta
cgttcttcgcaacgtcatttaaactccgcttctgcgcaacagactttgtctcaggcgctg
agtgaacattatggtcgtccggttgagctgacgattatcgaagacgataacccagagcga
ctgacgccgctggaatggcggcagacgatttacgaagaaaaactggcgcaggctcgccag
tcgattgctgcggatagcaacatccagactttgcgacgtttctttgacgccgaactggat
gaagagagcatccgccctgtttaa
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