KEGG   Hafnia paralvei: AL518_12645
Entry
AL518_12645       CDS       T05667                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hpar  Hafnia paralvei
Pathway
hpar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL518_12645 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpar02044]
    AL518_12645 (clpV)
Secretion system [BR:hpar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL518_12645 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 NBD_SMAX1 AAA_22 ClpB_D2-small Clp_N NACHT AAA_7 TniB AAA_14 RsgA_GTPase bpMoxR AAA_25 AAA_24 Rad17 Sigma54_activat AAA_6 CC_Liprin_beta
Other DBs
NCBI-ProteinID: AMH18784
LinkDB
Position
2870834..2873572
AA seq 912 aa
MIPIDLATLVKRLNLFSRQALEAAAAECMREQAAEITVAHVLLQMLVSVRSDLRVITEQA
EISADGLRRTLTVENYATVSSADSYPAFSPMLVEWLKEAWLLASAQMQHNELRGGVLLLA
LLHSPVRYIPPAAARLLTGINRDRLQQDFAQWTRESAESVMADEDRQTARTVAGSGDSLL
ARYAKNMTEDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLAL
RIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPVILFIDEAH
TLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEP
TAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARV
AINLSSPPKQISALTTRCHQYEAEIRQLEREMRIGLRSETARLDEVHAQNEAAQQERQSL
ECIWQQQQALVQEIIALRQQLLVMAAEGDKSTVPEQSDAVLANGTEHSRPDETTETGCTA
APEIVSPAERLAKLSAELDALHQSQLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVI
TDLPQWLGDTIKGQDLAIKHLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLA
ELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSIVLLDEV
EKAHPDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQMIVEHADNPEMMQEAL
YPVLADFFKPALLARMEVVPYLPLSKETLATIIAGKLARLDSVLRHRFSADVIIEPDVTD
EIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMASSTGIALIRLSAAEGVFTAEVED
VPTPLAEDETVI
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgatcccgatcgatttagccacgctggttaaacggctgaaccttttttcccgacaggct
ctggaagctgctgcagcggagtgtatgcgtgaacaggcggcagaaataaccgtggcgcat
gtgttgttgcaaatgctggtttcggtgcgcagcgatttgcgtgtgattacagaacaggca
gaaatcagcgcggatggtctacgtcggacgctgacggtggaaaattacgctaccgtcagc
tctgctgatagctacccggcgttttcaccgatgctggtcgagtggctaaaagaggcctgg
ctgctggcatctgctcaaatgcagcacaatgaactgcgtggtggcgttctgctgctggcc
ttgctgcattcccccgtgcgctacataccgccagccgccgcccgactgctaaccggtatt
aaccgcgaccgtctgcaacaggactttgcacagtggacacgggagtcggcggagtcggtg
atggctgatgaggacagacagactgcccgtacagtggctggttcaggcgatagtctgctt
gctcgctacgcgaaaaatatgaccgaagacgcccgtcaggggcgtcttgatccggtgctg
tgccgcgataacgaaatcgatctgatgatcgacattctttgtcgccgtcgcaagaacaat
ccggtggtagtaggggaagccggtgtcggtaaaagtgccttaattgaagggctggcactg
cgcatcgttgcaggccaggtgccggataagctgaaaaacactgacattatgacgctggat
ctcggtgccttgcaggcgggggcatcggtcaaaggggagtttgaaaaacgttttaaggga
ctcatggcggaagtgatttcctccccggtaccggtcattttgtttatcgacgaggcccac
acattgattggcgcaggtaatcaacagggtgggcttgatatctccaacctactgaaacct
gcgctggcacgcggcgagctgaaaaccatcgctgccacgacctggagcgagtacaaaaaa
tactttgagaaagatgctgcgttgtcgcgtcgcttccagttggtgaaagtgagtgagccg
acagcagcagaggcgacaattatcctgcgtggtctgtcggcggtgtatgagcagtctcat
ggcgtattgattgacgatgaggcgctacaggcggcggcaacgctcagtgagcgctacctg
tcaggtcgccagttgccagataaagccattgatgtgctggacaccgcctgtgcccgcgtg
gccattaacctctcttcgccaccgaaacagatttcggcgctgactacgcgttgtcatcag
tatgaggcggaaatccgccagcttgagcgcgaaatgcgcatcggtctgcgctcagaaacg
gcgcggctggatgaggtgcatgcacaaaatgaagccgctcagcaggaacgtcagtcgctg
gaatgcatctggcagcagcagcaggcgctggtgcaggagattatcgcgctgcgtcagcaa
ttgctggtgatggcggcagaaggggataagagcacggtgccggagcaaagtgatgcggtg
ctggctaatggcactgaacattctcgaccagatgaaacgacggaaacaggctgcaccgca
gcgcctgaaatcgtttctccggctgaacgcctggcgaagctgagtgctgaactggacgcc
ctgcaccagtctcagctactggtttctccgcatgttgataaaaaacaaatcgcagcggtg
attgccgaatggaccggcgtaccgcttaaccgtttgtcgcagaacgagatgtcggtgata
accgacctgccacagtggctgggcgacactatcaaaggccaggacctggcgattaagcac
ttgcacaaacacctgctgacggctcgcgcggatttacgtcgtcccggacgaccacttggc
gcgttcctgctggctggccccagtggtgtgggtaaaaccgaaaccgtgctgcaactggct
gaactgctttatggcggccgccagtatctcacgaccatcaatatgtccgagtttcaggag
aagcataccgtttcgcggctgattggttctcctccgggctatgtaggctacggtgaaggt
ggcgtgctgactgaggctatacgccagaaaccgtactctattgtactgctggatgaagtc
gaaaaagcacacccggacgtgctcaatcttttctatcaggcttttgataaaggcgagatg
gctgatggtgaaggccggctgattgactgtaagaatatcgtctttttcctcacctccaat
ctgggctatcagatgattgtcgaacatgctgataacccggaaatgatgcaggaagcgctg
tatcccgtgctggccgatttctttaaaccggcgctgctggcgcgtatggaagtggtgccg
tacctgcctctgtcaaaagagacgcttgccaccattattgccgggaagctggcgcgtctg
gatagtgtgttgcgccaccggtttagtgcggacgttattatcgaaccagacgttaccgac
gaaatcatgagtcgcgtcactcgcgctgaaaatggtgcgaggatgctggagtcagtgatt
gacggcgatatgttgccgccactctcgttgctgctgttgcagaaaatggcgtccagtacg
gggatcgctcttatccggctgtcggcggcagaaggtgtgttcacggcagaggtagaggat
gtcccgactccactggcagaggatgaaaccgttatatga

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