KEGG   Hafnia paralvei: AL518_17060
Entry
AL518_17060       CDS       T05667                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hpar  Hafnia paralvei
Pathway
hpar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL518_17060 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpar02044]
    AL518_17060 (clpV)
Secretion system [BR:hpar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL518_17060 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_16 AAA_22 AAA_25 NBD_SMAX1 nSTAND3 ATPase_2 AAA_7 IstB_IS21 NACHT AAA_14 AAA_24 nSTAND6 bpMoxR Sigma54_activat Zeta_toxin DUF815
Other DBs
NCBI-ProteinID: AMH19566
LinkDB
Position
complement(3801803..3804505)
AA seq 900 aa
MGNNSASLLRRLNPYCAQALAAAATLCQTRAHAEITVEHWLLKLLEQGEGDITVIARRYE
WDMDGLWQGLLDHLERLPHTIQGKPQLSDKLQQLIKHAWLDASLQENTDAVRSAHLLAAL
IGKPNLLATDAVWPLLSISTTQLSRLLPLLDAQSEERPELQTGLQHPQQPSSSNTESAAN
EPSTSGVSPMQEAHLAVLNKFTLDVTEKARSGSIDPVFGRDMEIRQMVDILSRRRKNNPI
LVGEPGVGKTALVEGLALRIAEGNVPDSLKTVSVRTLDLGLLQAGAGVKGEFEQRLKNVI
EAVQQSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYF
ERDAALERRFQMVKVDEPDDEMACLMLRGLKERYATHHGVHIQDAAVKAAVTLSRRYITG
RQLPDKGVDLLDTASARVRMSLDTVPEQLTQMNAQLAALEMEKQAIEQDLVFSSGADIER
LSAIDQLSVELQRQQTALDAQYQQERELTQQLLEVRQDISRQSERAAIQQQLSELQGNHP
LLSLDVDVRTVANVIADWTGVPLGSLLKDEQTSLLQLEHQLGERVIGQQAALGALAQRLR
AAKTGLTSENGPLGVFLLVGPSGVGKTESALALADDLFGGEKSLITINMSEYQEAHTVSQ
LKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGR
EIDFRNTVILMTANLGSDELMALLEQQPEASDSMLHELLRPILRDHFQPALLARFQTLIY
RPLDAVALRRIVAIKLGQVAKRLQRHYGLTCHIEESLMDTLVAACLLPDTGARNIDSLLN
QQILPVLSQQLLQRLAQQRKPDSLTLGFNDEEGITLDFGDEHNGEADTDCSVTTEARVIC
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgggaaataattcagcaagcttactgcgtcggttaaatccatattgtgctcaggcactg
gctgccgccgcaaccttatgccagacccgtgcccatgcggaaatcacggtagaacactgg
ttactcaagctgttagagcagggcgaaggtgacattacggtgatcgctcgccgttatgaa
tgggatatggacggcctatggcagggattgctggatcatttagagcgtcttccacatacc
attcagggaaaaccgcagctctctgacaaacttcagcaactgatcaaacatgcgtggcta
gatgcatcgttgcaggagaataccgacgccgtgcgttccgcacatctgcttgctgcgcta
atcggtaagcctaacttgctggcgacggatgccgtttggccgctgctgagtattagcacc
acacagctttcccgtttgttaccgctgctagatgcccagtcagaagagcgccctgaattg
caaactgggctgcaacatcctcaacagccatcctcgtctaataccgaatcggccgctaat
gaaccgagcaccagcggtgtttcgccgatgcaggaagcgcatttggcggtgctcaacaag
tttacccttgatgtgaccgaaaaagcgcgctccggtagcatcgaccccgtctttggccgc
gatatggaaatccgtcagatggtggatattctttcccgccgccgcaaaaataatccaatt
ctggttggtgagccgggtgtaggtaaaaccgcactggtagaaggattggcgctacgcatt
gccgaaggcaacgtccccgatagcttaaaaaccgtcagcgtacgcacattagatctgggg
ttgttacaggcgggcgcgggcgtgaagggcgagttcgaacagcgcctgaaaaacgtcatc
gaggccgtgcagcagtcgccagagcctgttttactatttatcgatgaagcgcacaccatc
attggcgcgggcaatcaggccggtggtgccgatgccgctaacctgctgaaaccggcgctg
gcacgcggcgaattacgcaccattgccgccaccacgtggtctgaatacaaacagtatttc
gaacgcgacgccgcgttagaacgtcgtttccagatggtcaaagtggacgagcctgacgat
gagatggcgtgcctgatgctacggggcttgaaagagcgctacgccacccatcacggcgtg
catattcaggacgccgcggtgaaagcggcagtcacgctgtcgcgccggtatatcaccgga
cgacaactgccggacaaaggtgttgatctacttgacaccgccagcgcgcgtgtacgtatg
agcttagacaccgtgccggaacagctcacgcagatgaatgcacaactcgcggcgctagag
atggaaaaacaagcgattgaacaggatctggtgttcagcagcggtgccgatatcgagcgc
ctgagtgccattgatcagctcagcgtagaattgcaacgtcagcaaacggcgctcgatgct
caatatcaacaagagcgcgaacttactcagcaattgctcgaagtgcgtcaagacatcagc
cgtcagtccgaacgcgccgcgattcagcaacagctcagcgaactacagggcaaccatcca
ctgctttcactcgacgttgacgtgcgtaccgtagccaatgtgattgctgactggacaggt
gttccgttaggcagcttgctcaaagacgaacaaactagcctgctacagcttgagcatcag
ctcggcgagcgggttatcggccaacaggcggcgttaggtgccttggctcaacgtctacga
gcggctaaaaccggtttaacctcagaaaacggcccgctcggcgtatttcttttggtcggc
ccaagcggtgtagggaaaacagagagcgcattagcgctggctgatgacctgttcggcggc
gaaaaatcgctgatcacgattaatatgtccgagtaccaagaagcgcataccgtttctcag
cttaaaggctcgcctccgggctacgtgggttatggtcagggcgggattttgaccgaggcg
gtacgcaagcgcccatacagcgtggtgctgctcgacgaagttgagaaggcgcatcgcgac
gttttaaacctgttctatcaggtattcgaccgtggctttatgcgcgacggcgaagggcgc
gagatcgatttccgcaataccgtgattttaatgaccgccaacctcggtagcgatgagctg
atggcgctgttagagcagcagccagaggcgtcggatagcatgttgcacgagctgctgcgt
ccgatcctacgcgatcacttccagcctgccttactggcacgtttccaaacgttgatctat
cgcccgctagacgccgtggcgctccgccgcattgtggccatcaaattagggcaggtggcg
aaacgtcttcagcgtcactatggactgacttgccatatcgaagagagtctgatggacacg
ctggtggcggcctgcctgctgccggataccggcgcgcgcaacatcgacagcctgcttaat
caacagatcttgccggtgctttctcagcagctattacagcgtttagcgcagcagcgaaaa
cccgacagtctgacgctggggttcaacgacgaggaaggcattacgctggatttcggtgat
gaacacaacggtgaagctgatacggattgctcggttacgacggaagcgagggtgatatgt
taa

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