KEGG   Hafnia paralvei: AL518_17085
Entry
AL518_17085       CDS       T05667                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
hpar  Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:hpar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpar02044]
    AL518_17085 (tssC)
Secretion system [BR:hpar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL518_17085 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 ConA_BAM2
Other DBs
NCBI-ProteinID: AMH19571
UniProt: A0A2A2MHD9
LinkDB
Position
complement(3809023..3810576)
AA seq 517 aa
MLMSVQENKAQGNATAVLEHEAPIMQGVYASLFEKINLNPVSSMTDIETFQNNEGLAEAS
ADERVTAAVSVFLDLLKQSAQKVEKLDKTLLDGHIAALDAQISSQLDAVMHHPDFQRVES
TWRGVKSLIDQTDFRQNVRIELLDVSKDHLAQDFEDAPEIAQSGLYSHTYIQEYDTPGGE
PIAATISNYEFGRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKNTMEEVAAIKDIGN
YFDRAEYLKWKSFRESDDARYIGLTMPRVLGRLPYGPDTIPVRSFNYVEEVKGPDHEKYL
WTNASFAFAANMVKSFINNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPE
TREFEFANLGFIPLSYYKNRDYACFFSANSTQKPALYETHDATANSRINARLPYIFLLSR
IAHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPADDLQASHPLRDAKVTVEDI
EDNPGFFRVKLFAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgctgatgtctgtacaggaaaacaaagcacagggtaatgctaccgctgtgttggaacac
gaagcaccaatcatgcagggcgtttacgcgtcgttgtttgagaaaattaatctcaatccg
gtctcttcaatgaccgatatcgaaaccttccaaaacaatgaaggcctcgcagaagcctct
gctgatgagcgagtgaccgctgccgtaagcgtatttttagacttgctcaaacagtctgct
caaaaagtggaaaagctggataaaaccttgctggatggccacattgcagcgcttgatgcc
caaattagcagccaattagatgcggtgatgcatcatccagattttcaacgcgtggaatcc
acatggcgcggtgttaagtcactgattgaccaaactgatttccgccaaaatgtgcgtatt
gaactgttagatgtgagcaaagatcatctggcacaggatttcgaagatgcgccagaaatt
gcgcaaagcggcctttattctcatacctacattcaggaatatgataccccaggcggtgag
cctatcgcggcaacgatttctaactacgagtttggccgtggcccgcaagatattgctctg
ctacgcaacatctcaaaagtggccgccgcggcacatatgccgtttatcggttccgtaggc
cccgcgttctttggcaaaaacaccatggaagaagtggctgccattaaagatattggcaat
tactttgaccgtgcagagtatctgaagtggaaatctttccgtgaaagcgacgatgcacgc
tacatcggcttaacgatgccgcgggtgttaggtcgtttgccctatggcccagatactatt
cccgttcgcagttttaactacgtagaagaagtcaaagggccggatcacgagaaatatctg
tggactaacgcttcgtttgcctttgcagccaacatggtgaaaagttttatcaacaacggc
tggtgcgtgcagatccgcgggccgcaggcgggcggcgctgtcaccgatttacctatccac
ctgtacgatttagggacgggtaatcaggtcaaaatcccatcagaggtgatgatcccggaa
actcgcgaatttgaattcgctaatctgggctttatcccactctcttattacaaaaaccgt
gattatgcgtgcttcttctctgccaactctacgcaaaaaccggcgctgtatgaaacgcac
gacgcaacggccaatagccgtattaatgcgcgtttgccatacatcttcctcctttcgcgt
attgctcattacctgaaactgatccagcgcgaaaacatcggcaccaccaaagatcgtcgt
ttgcttgaattggagttgaacaactggatccgtggtttggtcacggaaatgaccgatccc
gctgatgacttgcaggcttcgcacccgctgcgtgacgccaaggtaaccgttgaagatatc
gaagataacccaggtttcttccgcgtgaagctgtttgccgtaccgcatttccaagttgaa
ggaatggatgtgaatctgtctctggtttcgcagatgcctaaagccaaagcttaa

DBGET integrated database retrieval system