Hafnia paralvei: AL518_17785
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Entry
AL518_17785 CDS
T05667
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpar03009
]
AL518_17785
Enzymes [BR:
hpar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AL518_17785
Ribosome biogenesis [BR:
hpar03009
]
Prokaryotic type
ribosomal protein modification factors
AL518_17785
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AMH19693
UniProt:
A0A2A2MHD5
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Position
3980648..3981964
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AA seq
438 aa
AA seq
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MQQPRIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVLKHVHQYVPKPTHNP
FTSLVPEQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGVDVKHRTGFWNGQPVKTSMISLCEQLSSLGVWVRLHYVYPYPHV
DDVIPLMAEGKVLPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPQLTLRSTF
IVGFPGETEEDFQMLLDFLSEAKLDRVGCFKFSPVEGAAANELADQVPEEVKEERFHRFM
QLQQQISAQRLQDKVGHTLPVIIDEVDEEGAIGRSMADAPEIDGVVYLNGETKLKVGDVV
NVTIENVDEYDMWGSVCA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccgcgtattggttttgtgtcccttggttgcccgaaaaatctggtggactcc
gaacgtattctgaccgaactgcgcaccgaaggttatgatgttgtgcctcgttacgatgac
gctgagcttgtcatcgtaaatacctgcggttttatcgacagtgccgttcaggaatcgttg
gaggctatcggtgaagctctcaacgaaaacggaaaagtaattgttactggctgcttaggg
gcaaaagagaaccagatccgcgaagttcaccctaaagttctggaaattactggcccgcat
agttatgaagccgtgctcaaacacgtgcatcagtacgtgcctaagccaacgcataatcct
ttcaccagcttggtgccggaacaaggcgtgaaactgacgccaaaacattacgcttatcta
aaaatatccgaaggctgtaatcaccgctgcactttctgcatcattccatccatgcgtggc
gatctcgatagccgcccgattggctctgttttagatgaagccaaacggctggtggatgcc
ggcgtgaaagagctgctggtcatttcgcaagatacctctgcctacggcgtagacgttaaa
caccgcaccggtttctggaacggccagccggtcaaaaccagcatgattagcctgtgcgag
cagctatcatcgcttggcgtctgggttcgtctgcactatgtctatccatacccgcacgtt
gatgacgtgatcccgctgatggcagaaggaaaagtgcttccgtatctggatattccactt
cagcatgcgagcccaaaaatccttaagctgatgaagcgtcctggcgcggtagaacgcacg
ctggaacgaatcaaacgctggcgtgaaatctgtccgcagctaacactgcgctcaaccttc
atcgttggtttcccgggtgaaaccgaggaagatttccagatgctgctggatttcctgagc
gaagccaaactggaccgtgtgggttgcttcaagttcagccctgttgaaggcgctgccgcc
aacgagctggctgaccaagttcctgaagaagtgaaggaagagcgattccaccgtttcatg
cagcttcaacagcagatttcagctcaacgcctgcaggacaaagtaggccacacactaccg
gttattattgacgaagtagacgaagaaggcgccattggccgtagtatggccgatgctcca
gagattgacggagtcgtttacctgaacggtgaaaccaagctgaaagtgggcgatgtggtt
aacgtcaccattgaaaacgtcgatgaatatgacatgtggggcagcgtttgcgcttaa
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